Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a3258
Help
Entry
PSEBR_a3258 CDS
T01472
Name
(GenBank) Nuclease sbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pba03400
]
PSEBR_a3258
DNA repair and recombination proteins [BR:
pba03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSEBR_a3258
Archaeal homologous recombinant proteins
PSEBR_a3258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AEA69570
UniProt:
F2KI54
LinkDB
All DBs
Position
4023942..4025186
Genome browser
AA seq
414 aa
AA seq
DB search
MRLFHTSDWHLGQNLHGQERDFEHACFLDWLLRQLTHEKPDVLLIAGDIFDTVNPPVKAQ
ERLYDFIVSAHEQNANLTIVMIAGNHDSGSRIELPAPLMRRLRTHALGRVLWLDDGQLDV
ERLLLPLPDAKGKVKAWCLALPFLRPAEVTGAQLGDDYLRGIGQVHEWLIAAANNKRKKG
QALIAISHAHMAGGSVSEDSERSLIIGNAEALPASLFGPSISYVALGHLHKPQKVNGEER
IRYSGSPIPLSFSEIGYQHQILDITLDGEALVKVEPRLIPRAVNLQRLGPAPLADLLVQL
KDLPDIDLLADVQRQPWLEVRVRLDEPQPDLRHQVETALQGKAVRLVRIAAEYAGNGGAG
SADDGSALVELDQLSPQELFSRAWQDTYGNEVDEQTLKDFAVLLQDVQMESEQP
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtctgtttcacacctccgactggcacctggggcaaaacctgcacggccaggaacgc
gatttcgaacacgcctgcttcctcgactggctgctgcgtcaactgacccacgaaaagccc
gacgtattgctgatcgctggcgacatcttcgacaccgtcaacccgccggtcaaagcccag
gagcggctgtacgatttcatcgtcagtgcccatgaacagaacgccaacctgaccatcgtg
atgatcgccggcaaccacgactctggctcgcggatcgagctgcctgcgccgctgatgcga
cgcctgcgcacccatgccctgggtcgggtgctgtggctggacgacggtcaactggacgtc
gagcgcctgttgttgccgttgcccgatgccaaaggcaaggtcaaggcgtggtgcctggcc
ctgccgttcctgcgccctgccgaagtcaccggtgcgcaactgggcgacgactacctgcga
ggcatcggccaggtgcatgagtggctgatcgccgcggccaacaacaagcgcaagaaaggc
caggcgctgatcgccatcagtcatgcgcacatggccggtggttcggtgtccgaggattcc
gagcgcagcctgatcatcggcaacgccgaggccctgcccgccagcctgttcggcccgagc
atcagctacgtcgccctcggccacttgcacaagccgcagaaggtcaacggtgaagagcgt
atccgctacagcggttcgccgatcccgctgtcattttcggagatcggctatcagcatcag
atcctcgacatcaccctggacggcgaagccctggtcaaggtcgagccgcgcctgatcccg
cgggccgtcaacctgcaacgcctgggcccggcgccactggccgatctcctggtgcaactc
aaggacctgcccgacatcgacctgctggccgatgtccagcgccaaccctggctggaagtg
cgggtgcgcctcgatgagccgcagccggacctgcgtcaccaggtggagaccgcactgcaa
ggcaaggccgtacgcctggtgcggatcgccgccgagtatgccggcaacggtggcgctggc
agtgccgatgatggcagcgcgctggtggagctggatcaactcagcccgcaggagttgttc
agccgcgcctggcaggacacctacggcaacgaagtggacgaacagaccctcaaggacttt
gccgtgctgttgcaagacgtgcagatggagagcgagcagccatga
DBGET
integrated database retrieval system
