Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a3259
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Entry
PSEBR_a3259 CDS
T01472
Name
(GenBank) Nuclease sbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pba03400
]
PSEBR_a3259
DNA repair and recombination proteins [BR:
pba03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSEBR_a3259
Archaeal homologous recombinant proteins
PSEBR_a3259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
ABC_tran
nSTAND3
RsgA_GTPase
AAA_15
MMR_HSR1
AAA_25
AAA_22
cobW
Motif
Other DBs
NCBI-ProteinID:
AEA69571
UniProt:
F2KI55
LinkDB
All DBs
Position
4025183..4028824
Genome browser
AA seq
1213 aa
AA seq
DB search
MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR
LNNTGRDAKVPDVDGEIATGDPRTLLRRGTGDGYAEVDFRGIDGRRYRARWEANRAREKA
GGKLQASRQSLRDLDNDQLLASQKGEYKTQLEAALGLNFEQFTRAVLLAQSEFSAFLKAD
DNDRSELLEKLTDTALYTRLGRRAFDKAKQAKDSHRQLQDQATGVTPLAPEARAELDQRF
NDAQQQLKAQQAQLKQLEQQHTWLRDLGLLQDEHASAAEQLQQAQADWNALADERLKLVR
LEQLAPQRHQFIRQAELSRQLDPLAVQIQQLTQQQLNLHDQQAELEKSLGAAQLALAAAR
QHSSDSAPLLRQAFEEQSTLARLARDASQGAERQEQAQQACTEGQRTIDTLLEQQRQVAE
RLQRIAGTLEQSTHLTPLSDAWNAYRDRLQQLMLIGNRLNQGQAELATLEQGAARAAEEL
ATHRQDLEVLYKEAGAEPEAVAEQIQLLGNLLQDNRKQLRAFEDLTRLWASQQELDKRGA
ELEQRQQRALQERDRLVREGGEAKAELTIAEQTLTVTRELLERQRLARSESVEQLRAQLQ
DEQPCPVCGSIEHPYHQPEALLENLGRFDETEEANARKAVDLLNEKVIDLRAQYSGVIAQ
LKELKQQQEQLASQQQSLAPSLEAHPLSAQLLAQETNKRDAWLTQQNSQLNLRISQDEQR
QTALLTLQQDAARMTQRLREAEAASQQASQHLGNQQQELARDRQRLDEELSHFSALLPAD
TLQALRSEPAATFLQLDQQIAQRLEQLEQQRDELGEQLQRQQTLEKEQDRQQTRLQQLEA
ARLQFSALSEQQQACQEKLTRLLGEHTSAEQWQQQLDQRLEQTRDAEATANQQLQQLRND
LVQLAAELKARQEQAQSLDHERQALAAGIAQWRTTHPELDDAALEALLGLDEQHVSQLRQ
RLLNGEKAIEQARVLLTEREQRLQNHQAQHNGNLAPEQLAQALTELQGQFAVSEQHCAEL
RAEQAEDQRRQNANQALAQQIEQAYNEYQRWARLDALIGSATGDRFRKLAQAYNLDLLVH
HANAQLRQLVRRYRLKRGGSMLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLKIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQV
RRQGNGLSTVEVK
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctcgcgatccgcctcaagaacctggcgtccctggccgggccgtttgaaatc
gatttcaccgccgaacccttggccagcgccggcctgttcgccattaccggccccacgggc
gccggcaagagcacgctgctcgacgccctgtgcctggcgctgttcggcgccgtgccgcgc
ctcaataacaccgggcgtgacgccaaggtaccggacgtcgatggcgagattgccacgggc
gatccgcgcacgctgttgcgccgaggtaccggcgatggctatgccgaagtggattttcgc
ggcatcgacggacgccgctatcgggcccgctgggaagccaatcgcgcccgggaaaaagcc
ggcggcaagttgcaagccagccgccagagcctgcgggacctggacaacgatcaactgctg
gcgagccagaaaggcgaatacaagacccagctcgaagcggccctgggcctgaacttcgaa
cagttcacccgggccgtgctgctggcccagagcgagttcagcgcgttcctcaaggccgat
gacaacgatcgcagtgaactgctggaaaagctcaccgacaccgccctgtatacccgcctc
ggccgccgcgccttcgacaaggccaagcaagccaaggacagccaccggcagttgcaggac
caggccaccggtgtcacgccgctggcccccgaggcccgggccgagctggaccagcgtttc
aacgacgcccagcaacaactcaaggcccaacaggcgcaactcaagcaactggagcagcag
cacacctggctgcgcgacctgggcctgttgcaggatgaacacgccagcgccgccgaacag
ctgcaacaggcccaggccgattggaacgccctggccgacgaacgcctgaaactggttcgc
ctggagcaactggcgccccagcgccatcagttcattcgccaggccgaactgagccgacag
ctcgaccccttggccgtgcagatccagcagcttacccagcagcagctcaatctccatgac
cagcaggccgaactggaaaaaagcctgggcgccgcgcaactggcgctggctgcggcccgc
caacacagcagcgacagcgcgccgttgctgcgccaggcctttgaagagcaaagtaccctg
gcccgcctcgccagggacgccagccagggcgccgagcgccaggaacaggcacagcaggcc
tgcaccgaaggccagcgcaccatcgacaccttgctcgaacagcaaaggcaggtggccgag
cgcttgcagcgcatcgccggcacgttggaacaaagcacgcacctgaccccgctcagcgat
gcctggaacgcctatcgcgatcgcctccaacaactgatgctgatcggcaatcgcctgaac
cagggccaggccgaactcgccacactggaacaaggcgccgcccgcgccgccgaggaactc
gccacccaccggcaagacctcgaagtgctctacaaggaagctggcgccgagccggaggca
gtggccgaacagatccagttgcttggcaatctgctgcaagacaaccgcaagcaattgcgt
gcttttgaagacctgacccggctgtgggccagtcagcaagagctggacaaacgcggcgcc
gaacttgaacaacgccagcaacgggcgttgcaggaacgtgaccggctggtgcgtgaaggc
ggcgaagccaaggccgaactgaccattgccgaacagaccctgaccgtcacccgtgaactg
ctggagcgccagcgcctggcccgcagcgaaagcgtcgagcaactgcgcgcacagttgcag
gatgaacagccctgccccgtgtgtggcagcatcgagcatccttatcaccagcccgaagcc
ctgctggaaaacctcgggcgctttgatgaaaccgaagaagccaacgcccgcaaggccgtc
gacctgctcaatgaaaaagtcatcgacctgcgggcgcaatacagcggggtcatcgcccag
ctcaaggaactcaaacagcagcaggaacagctcgccagccagcaacagagcctggcaccc
agccttgaagcccacccgttgtcggcgcaactgctggcccaggagacgaacaagcgcgac
gcctggctgacccagcagaacagccaactgaacctgcgcatcagccaggacgaacaacgg
caaaccgccctgctgaccctgcagcaggacgccgcgcgcatgacgcagcggctgcgtgaa
gccgaggcagccagccaacaggcctcacagcacctgggcaaccagcagcaggagctggcc
cgcgaccgccagcgcctggacgaggaactgagccacttcagcgccctgctacccgctgac
accctgcaagccttgcgcagcgaacccgccgcaaccttcttgcagctcgaccagcagatc
gcccagcgcctggagcaactggaacagcagcgcgacgaactgggcgaacagctccagcgc
cagcagaccctggagaaagaacaggaccgccagcagacccgcctccagcaactggaagcg
gcccgcctgcaattcagcgccctgagcgagcaacaacaggcctgccaggagaaactcacg
cgattgctcggcgagcacaccagcgccgaacagtggcagcaacaactcgaccagcgcctg
gaacagacgcgggatgccgaggcgacggccaatcagcagttgcagcaattgcgcaacgat
ctggtgcaactggccgccgaactcaaggcccgacaggaacaggcgcaatccctggaccac
gaacgccaggcgctggccgccggtatcgcgcaatggcgcaccacccatccggaactggac
gatgccgccctcgaggccctgctcggcctggacgagcaacacgtcagccagttgcgccag
cgcttgctcaacggcgaaaaagccatcgaacaagccagagtcctgctcaccgaacgcgag
cagcgcctgcaaaaccaccaggcccaacacaatggcaacctggcgcctgagcaactcgcc
caggctctcaccgaactgcaaggccaattcgccgtaagcgaacagcactgcgccgaactg
cgcgccgaacaggccgaagaccagcgccggcagaacgccaaccaggccctggcccagcag
atcgaacaggcctacaacgagtaccagcgctgggcgcgcctcgatgccctgatcggttcg
gccaccggcgaccgtttccgcaagctggctcaggcctacaacctcgacttgctagtgcac
cacgccaatgcccaactgcggcaactggtgcgccgctaccggctcaagcgcggcggcagc
atgctcgggctgctggtgatggacacggaaatgggcgatgaactgcgctcggtgcattcg
ttgtccggcggcgaaaccttcctggtctccctcgccttggcattgggcctggcctcgatg
gcgtccagcacactgaagatcgaatcgctgttcatcgacgaaggcttcggcagcctcgac
cccgaatcgctgcaactggcgatggacgccctcgacggcctccaggcccagggccgcaag
gtcgcggtgatctcccacgtgcaggaaatgcacgagcggatcccggtgcagatccaggtg
cgtcgccagggcaacggcttgagcacagtggaggtgaaatga
DBGET
integrated database retrieval system
