Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a3287
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Entry
PSEBR_a3287 CDS
T01472
Name
(GenBank) Membrane-bound lytic murein transglycosylase D
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pba01011
]
PSEBR_a3287
Enzymes [BR:
pba01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
PSEBR_a3287
Peptidoglycan biosynthesis and degradation proteins [BR:
pba01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
PSEBR_a3287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM_RLK
LysM3_LYK4_5
LPAM_MltD
LysM2_CERK1_LYK3_4_5
LysM_OapA
Motif
Other DBs
NCBI-ProteinID:
AEA69602
UniProt:
F2KI86
LinkDB
All DBs
Position
4064133..4065533
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AA seq
466 aa
AA seq
DB search
MAQAIAVAVSATLAGCQSTSQLPQTDAAHTPNIAARAKQKPVWLSEKPSPQVPQDVWERM
RQGFQLQETVGVNPRIEQQRLWFASNPSFMENAGERGSLYIHYIVERLEERNMPLELALL
PVIESAYNPMAYSRANAVGLWQFIPSTGRYFNLRQTRFYDGRRDITASTTAALDYLTRLH
DMFNGDWLLALAAYNAGEGTVSRAIERNEKLGLPTDYWNLPLPSETQAYVPKLLALSQVV
LSPDAYGVNLNPIANEPYFQVVEINQRMDLSKVAAVANIDEDELFQLNPAFKQRTTIDGP
QHLLVPTSKAQLLTASLSTMRPEELISQRSLKPVFETADDSDVEGARRTYRVKRGENLAQ
IAKANNVQTKDLQRWNKLSGNKLKVGQTLVMQDAKASKATSKRISTVVAANSKDQKKQTQ
YKVKQGDSLYVVAKRFNVEMQHLKRWNPRMGKALKPGQMLTVYSPH
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
ttggctcaagccattgcggtggccgtgtccgccacattggcgggctgccagagcacgagc
cagctgccgcagaccgacgcggcgcacacgccgaatatcgccgctcgcgccaaacagaag
ccggtatggctcagtgagaaacccagccctcaagtaccccaggacgtctgggagcgcatg
cgccagggcttccagctgcaggaaacggtcggcgtcaatccacgtatcgagcaacagcgc
ctgtggttcgccagcaacccttccttcatggaaaacgccggtgagcgtggcagcctgtac
atccattacatcgtcgaacgcctcgaagagcgcaacatgccgctggagctggcgttgctg
ccggtgatcgagagtgcctacaaccccatggcctattcccgggccaacgcagtgggcctg
tggcaattcatcccgtccacggggcgttacttcaacctgcgccagacccgcttctatgac
gggcgtcgcgatatcaccgcctccaccacggccgccctggactacctgacgcgcctgcac
gacatgttcaacggcgactggttgctggcgctggccgcctacaacgccggcgagggtacg
gtcagccgcgccatcgagcgcaacgagaagcttggcctgcccaccgactactggaacctg
ccgctgcccagcgaaacccaggcttatgtgccgaagttgctggcgctgtcccaggtggtg
ctctcgcccgatgcctatggcgtgaacctcaacccgatcgccaacgaaccctatttccag
gtcgtcgagatcaaccagcgcatggacctgtccaaggtcgcggcggtggccaacatcgac
gaagacgagctgttccagctcaacccggccttcaagcagcgcaccaccatcgacggcccc
cagcacctgctggtgcccacgtccaaggcccagttgctgaccgccagcctgtcgaccatg
cgccccgaagagctgatcagccagcgctcgctcaagccggtgttcgagacagccgacgac
agcgacgtggaaggcgcccggcgtacctaccgagtcaagcgcggcgaaaacctcgcccag
atcgccaaggccaacaacgtccagaccaaagacctgcaacgctggaacaaactcagcggc
aacaagctcaaggtcggccagaccctggtgatgcaggacgccaaggccagcaaggccacc
agcaagcgcatcagcaccgtggtggccgccaatagcaaggaccagaagaagcagacccaa
tacaaggtcaagcaaggtgattcgctgtacgtcgtcgccaagcgtttcaacgtggaaatg
cagcacctcaagcgctggaacccacggatgggcaaggccctcaagcctgggcagatgctg
acggtctactccccgcactga
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