Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a3311
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Entry
PSEBR_a3311 CDS
T01472
Name
(GenBank) Conserved hypothetical protein
KO
K11902
type VI secretion system protein ImpA
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Pathway
pba02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PSEBR_a3311
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pba02044
]
PSEBR_a3311
Secretion system [BR:
pba02044
]
Type VI secretion system
Imp/Vas secretion system core components
PSEBR_a3311
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ImpA_N
Motif
Other DBs
NCBI-ProteinID:
AEA69627
UniProt:
F2K7N6
LinkDB
All DBs
Position
complement(4092891..4093973)
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AA seq
360 aa
AA seq
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MSLPISPLPELVSQLLEPISAESPCGPDLRYEPEYDQLRELRREDDTSLPTGVWQSSIKR
ALWPDLERLATTLLLERSKDLMISAWLGEAWLHMAGLEGLPGSLALVAGLCERYPEQLHP
QAEDGDQSWRVIPLEWLARRYSEVLLTRVPLFDGREQAFAAFSLDDWQRLQRQQVLVNDS
KNAKASAEAARNDQKKLGELIRNTPLSFWLHRQGSLMLSLQHLQRLEAWSDAYLGNLAPG
YKSLQDVMQALLTLVEEFIAMHPQQPTVAPVQTSPASTTSTSQPQAAPAQVFQEPANREE
AYRQLMVIAGYLARTEPHSPVPYLIRRGVEWGNKPLSELLGELISADAESRRLWTLLGVL
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
gtgagcttgccgatatcgcctttgcctgagctggtcagccagttgctcgagccgatcagc
gccgaatcgccctgtggcccggacctgcgctacgaaccggaatacgaccagttgcgcgaa
ttgcgccgggaagacgacaccagcctgcccaccggcgtgtggcagtcttcgatcaagcgc
gccctgtggccagacctggaacggcttgcgaccacgttgctgcttgagcgcagcaaggac
ctgatgatcagcgcctggctgggggaggcctggctgcatatggccgggctggaggggttg
ccgggtagcctggcgctggtggcggggctgtgtgagcgctatccggagcagttgcacccc
caggccgaggacggcgaccagtcgtggcgggtgatcccgctggagtggctggcccggcgc
tacagcgaagtgctgctgacgcgggtgccgttgttcgacggccgggagcaggccttcgcc
gctttctccctggacgactggcaacgcttgcagcgccagcaagtgttggtcaacgacagc
aagaacgccaaggcctcggccgaagcggcgcgcaacgatcaaaagaaactcggcgaactg
attcgcaacacacccttgtcgttctggttgcaccgccaaggcagcctgatgttgagcctg
caacacctgcaacggctcgaagcctggagcgacgcttacctgggcaacctggccccgggc
tacaaatccctgcaggacgtgatgcaggccttgctgacactggtagaggagttcatcgcg
atgcacccacagcaacccaccgtcgcgccggtgcaaacgtccccggcatccacgacgtcg
acgtcccagccgcaggcggctccagcccaggtcttccaggaaccggccaatcgtgaagag
gcctaccgacagctaatggtcatcgccggttacctggcccgtaccgaaccccacagcccg
gtgccctacctgatccgacgcggcgtggagtggggcaacaagccgttgagtgagttgctg
ggggaactgatcagtgccgatgccgagtcccggcgcttgtggacgttattgggcgttctc
taa
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integrated database retrieval system
