Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a3314
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Entry
PSEBR_a3314 CDS
T01472
Name
(GenBank) Conserved hypothetical protein
KO
K11893
type VI secretion system protein ImpJ
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Pathway
pba02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PSEBR_a3314
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pba02044
]
PSEBR_a3314
Secretion system [BR:
pba02044
]
Type VI secretion system
Imp/Vas secretion system core components
PSEBR_a3314
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
AEA69630
UniProt:
F2K7N9
LinkDB
All DBs
Position
complement(4098571..4099863)
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AA seq
430 aa
AA seq
DB search
MQLLPQHFQLQGLRAEALAAYFAGACNPWFWGVSQLEVDPSALSAGQVRLLQLQGTLPDG
LPVNLQAGVGPTLELDIGEAIDKTDDATVTVYLAVSPLWRAGQLVPLKGRLQSVVGEALP
DLTSGSFPESITVWRPNPRLCTQLSKADSICLPLLRIRKEGGGFWRVPYTPPTPILLPES
ALGRRVAGVCARAREKCMFLAGRLRQAQAAGNQDDAVEIRRQLTALWARLPEVEGALNTQ
VATPQALYGLLLGLAGSWSALDPLAGVPAFAPLDFLELQRGYEPLLDWLETTLELVRAGY
RSLAFERNEQVFSIQLPDDQPDQRLVIGLRMPNGASEQAAGEWLRGAIIASARHIPLLSR
QRMSGLPHQAMSRNEQVAYSVGDDTRLFVVAASGQWFDAQLPLHIVAPASAQASSPWQVV
LFVAQASESA
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgcaattgctgccccagcattttcaattgcaagggctgcgcgccgaggcgctggccgcg
tattttgccggggcctgcaatccttggttctggggtgtcagccagttggaagtcgatcct
tcggccctcagcgccggccaggtgcggctgctgcaactgcaaggcaccttgccggacggc
ttgccggtcaacctgcaggccggtgtcgggccgaccctggagctggacatcggcgaggcg
atcgacaagaccgacgacgccactgtgactgtgtacctggccgtcagcccactgtggcgc
gccgggcaattggtgccgctcaaggggcgcctgcaatcggtggtcggcgaggcgttgccg
gacctcaccagcggttcatttcccgagtcgatcaccgtctggcgacccaacccgaggttg
tgtacgcaactgagcaaggccgattcgatctgcctgccgctgttgcgcatccgcaaggag
ggcggtggcttctggcgcgtgccctacaccccgccgacaccgatcctgttgccggagtcg
gctctcggtcgacgggtcgccggagtgtgcgcccgggcccgggagaagtgcatgtttctc
gccggtcgcttgcgccaggcccaggcggccggcaaccaggacgatgccgtggagatccgc
cggcaattgaccgccttgtgggcgcgcttgccggaagtcgagggcgcgctgaacacccag
gtggcgacgccccaggcgctctacggtttgctgctggggttggccgggagctggtcggcc
ctcgatccactggcgggcgtcccggccttcgcaccgctggattttctcgaattgcagcgc
ggctacgagccgttgctcgactggctggaaaccaccctggaactggttcgtgccggctat
cgcagcctggccttcgaacgcaatgagcaggtcttctcgatccagttgcctgacgaccaa
ccggaccaacgcctggtgatcggcctgcgcatgcccaacggcgccagcgagcaggcggcg
ggcgagtggttgcgcggggcgatcatcgcgtcggcgcggcatatcccgctgctgagccga
cagcgcatgagcggtctgcctcaccaggccatgagccgcaacgaacaggtggcctacagc
gtgggcgacgacacccgtttgtttgtggtggcggccagcgggcaatggttcgacgcgcaa
ttgccgctgcacatcgtggcgccggcctcggcccaggccagtagcccgtggcaagtggtg
ttgttcgtggcgcaagccagtgaaagtgcctga
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