Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a3317
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Entry
PSEBR_a3317 CDS
T01472
Name
(GenBank) Conserved hypothetical protein
KO
K11900
type VI secretion system protein ImpC
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Pathway
pba02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PSEBR_a3317
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pba02044
]
PSEBR_a3317
Secretion system [BR:
pba02044
]
Type VI secretion system
Imp/Vas secretion system core components
PSEBR_a3317
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
TssC
Motif
Other DBs
NCBI-ProteinID:
AEA69633
UniProt:
F2K7P2
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All DBs
Position
4101232..4102713
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AA seq
493 aa
AA seq
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MPASSSAQTSESTTQTLSLLDKIIAEGRMAHDDSQQDYARDMLAEFATQVLDEGMAIDKD
TVAMINDRISQIDQLISAQLNEVLHHPDLQKLEASWRGLHLLVQNTETSTRLKLRLLNVT
QKELQNDLEKAVEFDQSALFKKIYEEEYGTFGGHPFSLLVGDYTFGRHPQDIGLLEKLSN
VAAAAHAPFIAAASPRLFDMTSFTELAIPRDLSKIFESQELIKWRAFRESEDSRYVSLVL
PHFLLRLPYGPDTLPVEGINYVEDVNGTDHSKYLWGNAAWTLAQRITEAFAKYGWCAAIR
GAEGGGAVEGLPAHTFRTSSGDLSLKCPTEVAITDRREKELNDLGFISLCHKKNSDVAVF
FGGQTTNKAKAYNTNEANANARISAMLPYVLAASRFAHYLKVIMRDKVGSFMTRDNVQTY
LNNWIADYVLINDNAPQEIKAQYPLREARVDVTEVAGKPGAYKATVFLRPHFQLEELTAS
IRLVATLPPPVAA
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcttcatccagcgctcaaaccagcgagagcacgacccagaccctgtccctgctg
gacaagatcatcgccgaaggccgcatggcccacgacgacagccagcaagattacgcccgc
gacatgctggccgaattcgccacccaggtcctcgacgaaggcatggccatcgacaaggac
accgtggcgatgatcaacgaccgcatcagccagatcgaccagttgatcagcgcccagcta
aacgaagtgctgcaccaccccgacctgcagaaactcgaagcctcctggcgcggcctgcac
ctgctggtgcagaacaccgagaccagcacccggctcaaattgcgcctgctcaacgtcacc
cagaaagaactgcagaacgatctggaaaaagccgtcgaattcgaccagagcgcgctgttc
aagaaaatctacgaggaagaatacggcaccttcggcgggcatccgttcagtctgctggtg
ggcgactacacctttggccggcatccccaggacatcggcctgctggaaaaactctcgaac
gtcgccgccgccgcacatgccccgttcattgccgcggccagcccgcggttgttcgacatg
accagcttcaccgaactggcgatccccagggacctgtcgaagattttcgaaagccaggag
ctgatcaagtggcgcgccttccgtgaaagcgaagactcgcgctacgtatccctggtgctg
ccgcacttcctgctgcgcctgccatacggcccggacacgctgccggtggaaggcatcaac
tacgtcgaagacgtcaacggcaccgaccacagcaaatacctgtggggcaacgccgcctgg
accctggcgcaacgcatcaccgaagccttcgccaaatatggctggtgcgcagccattcgc
ggggccgagggcggtggcgcggtcgaaggcctgccggcccatacgttccgcaccagttcc
ggggatctgtcgctcaaatgcccgaccgaagtggcaatcaccgaccgccgtgaaaaggaa
ctcaacgacctgggcttcatctccctgtgccacaagaaaaacagcgacgtggcggtgttc
ttcggcggccagaccaccaacaaggccaaggcctacaacaccaacgaggccaacgccaac
gcgcggatctcggcgatgttgccatacgtgctcgcggcctcgcgcttcgcccattacctg
aaggtgatcatgcgtgacaaggtcggcagtttcatgacccgcgacaacgtgcagacctac
ctcaacaactggatcgccgactacgtgctgatcaacgacaacgcgccgcaagagatcaag
gcgcagtacccgttgcgcgaagcacgggtggacgtgacggaagtggccggcaagccaggg
gcctacaaggccacggtgttcctgcggccgcacttccagctggaggagctgaccgcctcg
atccgcctggtggcgaccctgccgccaccggtagctgcctga
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