Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a340
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Entry
PSEBR_a340 CDS
T01472
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Pathway
pba03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PSEBR_a340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pba03400
]
PSEBR_a340
Enzymes [BR:
pba01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
PSEBR_a340
DNA repair and recombination proteins [BR:
pba03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PSEBR_a340
Prokaryotic type
PSEBR_a340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
EndIII_4Fe-2S
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AEA66479
UniProt:
F2KBD7
LinkDB
All DBs
Position
complement(419074..420141)
Genome browser
AA seq
355 aa
AA seq
DB search
MRAEQFSTAVLDWFDRHGRHDLPWQQAISPYRVWVSEIMLQQTQVSTVLNYFDRFMASLP
TVQALAAAPEDEVLHLWTGLGYYTRARNLQKTAKIVVEQYGGEFPRDVEKLTELPGIGLS
TAGAIASISMGLRAPILDGNVKRVLARFTAQEGYPGEPKVAKQLWATAERFTPQDRVNAY
TQAMMDLGATLCTRSKPSCLLCPLKQGCEAHMLGLETRYPIPKPRKEVPKKRTLMPMLAN
HEGAILLYRRPSTGLWGGLWSLPELDDLDDLQHLALQHSLELGSQQEMPSLVHTFSHFQL
AIEPWLVRVRETGHHVAEADWLWYNLATPPRLGLAAPVKTLLERAAAVMNAGELQ
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgagagccgagcagttttccaccgccgtactggactggttcgaccgccacgggcgccac
gatttgccctggcaacaagccatctcgccctatcgggtgtgggtctcggaaatcatgttg
cagcagacccaggtcagtaccgtgctcaactacttcgaccggttcatggcctcgctgccc
accgttcaagccctggccgccgcgccggaggacgaagtgctgcacctgtggaccgggctg
ggctattacacccgtgcgcgcaacttgcagaaaaccgcgaaaatcgtcgtcgagcagtac
ggcggcgaatttccccgggacgtggaaaaactcaccgagttgccggggatcggcctgtcc
accgccggtgccattgccagcatcagcatgggcctgcgggcgccgattctcgatggcaac
gtcaagcgggtactggcgcgcttcaccgcccaggaaggctacccaggcgaacccaaggtt
gcgaaacagctgtgggccaccgccgagcgcttcacgccacaggaccgcgtcaacgcctac
acccaggcgatgatggacctgggcgccacgctctgtacccgtagcaagcccagttgcctg
ctctgcccgctgaagcaaggctgcgaggcccacatgctgggcctggaaacccgctacccg
attcccaagcctcgcaaggaagtgcccaagaagcgcaccttgatgccgatgctggcaaac
cacgaaggcgcgatcctgctttaccgtcgcccttccacggggctgtggggcggtctgtgg
agcctgccggaacttgacgacctcgacgacctgcagcatctggccctgcaacactcgctg
gagttgggcagccaacaggaaatgccaagcctggtgcacaccttcagccacttccagttg
gcgatcgaaccctggctggtccgggtccgggaaaccggccatcacgtggccgaggccgac
tggctctggtataacctcgccaccccgccgcgcctgggccttgccgccccggtcaaaacc
ttgctcgaacgcgcggctgccgtaatgaacgcaggagagttgcaatga
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