Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a3402
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Entry
PSEBR_a3402 CDS
T01472
Name
(GenBank) putative Transcription factor; putative carbohydrate diacid transcriptional activator CdaR
KO
K02647
carbohydrate diacid regulator
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pba03000
]
PSEBR_a3402
Transcription factors [BR:
pba03000
]
Prokaryotic type
Helix-turn-helix
Other families
PSEBR_a3402
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Diacid_rec
HTH_30
GGDEF_2
HTH_8
GAF
Motif
Other DBs
NCBI-ProteinID:
AEA69725
UniProt:
F2KIC9
LinkDB
All DBs
Position
complement(4204271..4205395)
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AA seq
374 aa
AA seq
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MFELDHDLAQDIVDRAMAILPYNVNVMDNQGLILGSGERERVNTRHEGAQLVLANGRVVE
IDEHTAMHLKGVQPGINLPLMLDQRLIGVLGITGEPAQLRTYAELVRMTAEMLVGQRNQQ
AEQQWRRQRCDDLLALLLGDAGDSPRLLDEARQMGLKPQLSRVPYLFELGLEHGPGQTVE
TLSAWLMSRYPDSWCLTSSKSSLLWCRPVTASVENERLLGKLDGLGWNILRIAVGGQAEG
LAGLRRCYRRVADLLAYGRDVLPQSRLLALNRYRLPVLLWRHRSDDALDELLTPLRKVIA
KDSNGQLLATLRSWCEHDGQSQACADALGIHRNSLRYRMERIAELSGVDPLRLDGMLALY
LGVQLLPQTADTPT
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaactcgatcacgacctggcgcaggacatcgtcgaccgggcgatggcgatcctg
ccgtacaacgtcaatgtcatggacaaccagggcttgatcctcggcagcggcgagcgcgag
cgggtcaacacccgtcacgagggcgcgcaactggtcctggctaacggtcgggtggtggaa
atcgacgagcacaccgcgatgcacctcaagggtgtgcagcctgggatcaacctgccgctg
atgctcgatcaacggctgatcggcgtcctgggcatcacgggtgagcctgcgcaactgcgc
acttacgccgagctggtgcgcatgaccgccgagatgttggtgggacagcgtaaccagcag
gccgagcagcaatggcgccgccagcggtgtgatgacttgctggcgctgctgttgggcgat
gcgggggattcgccgcgattgttggacgaagcccggcaaatgggcctcaagccgcaattg
tcgcgggtgccgtatctgttcgaactgggcctggaacatgggcccgggcagaccgtcgag
acgttgagcgcgtggttgatgtcgcgctacccggacagttggtgcctgacctcgtccaaa
tcttccttgctctggtgccggccggtcaccgcctcggtggagaacgagcggttgctaggc
aagctcgatgggctgggctggaacatcctgcggatcgcagtgggcgggcaggctgaaggg
ttggcgggcttgcggcgttgctatcggcgggtggctgatctgctggcctatgggcgtgat
gtgttgccgcaatcgcgcctgctggccctcaaccgctatcgcctgccggtgctgctctgg
cgccatcgcagcgacgatgccctggacgaactgctgaccccgttgcgcaaggtcatcgcc
aaggacagcaacggccaactgctcgccaccctgcgcagttggtgcgagcacgacggccag
agccaggcctgcgccgacgccctgggcatccaccgcaacagcctgcgctaccgcatggaa
cgcatcgccgaactcagcggcgtggacccgttgcgcctggacgggatgctggcgttgtac
ctgggggtgcagctattgccgcagaccgccgatacacccacataa
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