Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a3409
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Entry
PSEBR_a3409 CDS
T01472
Name
(GenBank) Putative c-di-GMP phosphodiesterase
KO
K26148
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
PSEBR_a3409
Enzymes [BR:
pba01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
PSEBR_a3409
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GFIT
Motif
Pfam:
EAL
CSS-motif
Motif
Other DBs
NCBI-ProteinID:
AEA69732
UniProt:
F2KID6
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Position
4212718..4214262
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AA seq
514 aa
AA seq
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MPLTATRAHTRPRRYLVTLLCGLVPMLSGLAILYMQAERTLAQQTRQTAEELVRQIELML
DNTALAAHELLPLAGQPCEAVKLALREQVTRRPFVRSTNLIWDNNLYCSSLFGAFEERVN
PSDYHQGSLWLMDGNPVTPDTALLIYRINEGHQGALATLDGYHLTNVLRLIGRQSRLRLQ
VGPNWLAADGKVRPAPIPGLPVAQSELGSSRYAFNVEAGFDEGETWRYMAREYPPLFSLL
IFFGVVAGTLGHWLQKRASSPSRELQRALEAGEFVPYLQPVVHSDSKRWAGVEVLMRWNH
PKEGLVRPDLFIPFAEHSGLIVPMTRGLMQQTMHLLAPLAPQLEAPFHVGINITARHCQD
LALVDDCREFLAAFAPGATALVLELTERELIEPTPVTRQLFDQLRELGVKIALDDFGTGH
SSLAYLRQFNVDFLKIDQSFVAMIGADTLSRHLLDSIIELSGKLGLDMVAEGVETVEQSD
YLSAHGVNFLQGYLFGRPISGQAFIETLTDLNGS
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgcccttgaccgccacacgcgcgcacacccgcccccgtcgctatctcgtcaccctgctt
tgcggcctggtaccgatgctgtcagggctggccattttgtacatgcaggccgaacggacg
ctggcgcaacagacccggcagaccgccgaggaactggtcaggcagatcgagctgatgctc
gacaacacggccttggcggcccatgaactattacccctggccggccagccctgcgaagcg
gtgaagctggcattacgcgaacaagtgacgcgccggccctttgtccgttcgaccaacctt
atctgggacaacaacctgtattgcagctcgctgttcggtgccttcgaggaacgcgtcaac
ccgagcgactaccatcaaggcagcttgtggctcatggacggcaacccggtcacgccggat
accgcgctactgatttaccggatcaacgagggccatcaaggcgccttggccacgcttgac
gggtaccacctgacgaacgtcttgcgcttgatcggccgccagagccggctacggctgcaa
gtcgggccgaactggctggcggcggacggcaaggtccgaccggcgcccatacccgggctg
ccggtcgcccaaagcgagctgggttcatcgcgctacgccttcaacgtagaagccggcttc
gatgagggtgaaacctggcgctacatggccagggaatatccgccgctgttcagcttgctg
atcttcttcggcgtcgtggccgggaccctcgggcactggctgcaaaaacgcgcctcctcg
cccagccgtgaactgcaacgggccctggaagccggcgagttcgtgccctatctgcaaccg
gtcgtgcacagcgacagcaaacgctgggccggcgtcgaagtgctgatgcgctggaatcac
cccaaggaaggcctcgttcgcccggacctgttcatcccgttcgccgaacacagcggcctg
atcgtaccgatgacacgggggctgatgcagcagaccatgcatctgctggcaccgctggcg
cctcaactcgaagcaccgtttcatgtcggcatcaacatcaccgcccgccactgccaggat
ctggcgctggtggacgattgtcgcgaatttctcgccgccttcgcgccgggtgcgactgcc
ctggtgctggagttgaccgagcgcgaactgatcgaacctacgcccgttacccggcaactg
ttcgaccagctgcgggaactgggcgtcaagattgccctcgacgatttcggcacgggtcat
tccagcctggcgtacttgcgccagttcaacgtggatttcttgaagatcgaccagagtttt
gtcgcgatgatcggtgccgatacgctgtcacggcacctgctcgacagcatcatcgaactg
tcgggcaagctgggcctggacatggtggccgagggcgtcgaaaccgtcgagcaaagcgac
tacctgagcgcccatggggtgaactttctacagggttatctatttggtcgaccgattagc
gggcaggcgttcattgagaccttgaccgaccttaatggcagttaa
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