Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a3504
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Entry
PSEBR_a3504 CDS
T01472
Name
(GenBank) putative ABC transporter, periplasmic component
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Pathway
pba02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSEBR_a3504
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pba02000
]
PSEBR_a3504
Transporters [BR:
pba02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
PSEBR_a3504
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AEA69840
UniProt:
F2K819
LinkDB
All DBs
Position
complement(4314899..4316542)
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AA seq
547 aa
AA seq
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MSDNKNGIKDQLITGTESLRVFEGLNRGMSRRHALQMLGLAGVAAAGAGSLFGAAGKLLA
DEQASPGKGKPGGRIRVAGISSSTADTLDPAKGSSSTDYVRHYMFYNGLTRFDSHMVPQL
ELAERMDTTDATLWVITLRKEVTFHNGKGLTAADVVFSLMRHKDPITGSKVLPLAEQFAE
VKATGTHEVQIRLSGPNAELPSILAVSHLLIVPEGTSDFNQGIGTGPFKVKEFKPGVRSI
GARNTNYWKPGLPYLDEIEFIGIGDEPSRVNALLSGDVQIINEVNPRSTTRIKDSTTHRV
VDSPSGNYTDLIIRQDQMPGQSPEFTEAMKLLLDREQVKSAIFRGFARVGNDHPIAPGSR
FYNADLPQRTYDPEKARFLLKKAGMENISMPVMCSPAATGSVDVAVLLQQSAKEAGLKLN
VNRLPSDGYWSNHWAKHPLSFGNINPRPNADMLFSQFFQSTAPWNESGWKNPQFDQLLIQ
ARGETDEAKRGQMYADMQTLVHDHSGIGIPVFISNIDGVDQRVKGYGTNPLGGFMGYMFA
EQVWLDA
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacaataaaaacggcatcaaagaccagttgatcaccggtacagaaagtctgcgt
gttttcgaagggctcaaccgcggcatgtcgcgccgccatgcattgcagatgctcgggctg
gccggtgtagccgcggcgggtgccggcagtctgttcggtgccgccggcaagctgcttgcc
gatgagcaggcaagccccggcaaaggcaagcccggcgggcgtatccgggtcgccggtatc
tccagttccaccgccgataccctggacccggccaaaggctcatcgtccacggactacgtg
cgtcattacatgttctacaacggcctgacgcgtttcgacagccacatggtgccgcaactg
gaactggccgaacgcatggacaccaccgacgccacgctctgggtgattaccctgcgcaag
gaagtgaccttccacaacggcaagggcctcaccgccgccgacgtggtgttttccctgatg
cgtcacaaggacccgatcaccggttccaaggtcttgccgctggccgagcagtttgccgag
gtcaaggctaccggcacccatgaagtgcagatacgcctgagcggcccgaatgccgagctg
ccgtcgatccttgccgtatcccacctgttgatcgtccccgagggcaccagcgatttcaac
cagggcatcggcaccggcccgttcaaggtcaaggaattcaagccaggggtgcgttccatc
ggtgcgcgcaacaccaactactggaagcctggcctgccgtacctcgacgaaatcgaattc
atcggcatcggtgacgaaccgtcacgggtcaatgcgttgctgtcgggcgacgtgcagatc
atcaatgaggtcaacccgcgctcgaccacgcgcatcaaggacagcaccacccatcgcgtg
gtggattcgccgtcgggtaactacaccgacctgatcattcgccaagaccagatgcccggc
cagagcccggagtttaccgaggcgatgaaactgctgctggaccgcgaacaggtcaagtcg
gcgatcttccgtgggttcgccagggtcggtaacgaccatccgattgcgcccggctctcgt
ttctacaacgccgacctgccgcaacggacctacgatccggagaaggcccgtttcctgctg
aagaaggccggcatggaaaacatcagcatgccggtgatgtgctcgccggccgccaccggt
tcggtcgacgttgccgtgctgctgcagcaatcggccaaggaggccgggctcaagctcaac
gtcaatcggctgccgagcgacggctattggtccaaccactgggccaagcacccgctgagc
ttcggcaacatcaacccgcggcctaacgccgacatgttgttctcgcagttcttccagtcc
acggcaccgtggaacgaatccggctggaaaaacccgcagttcgaccagttgctgatccag
gctcgcggtgaaaccgatgaggccaagcgcgggcagatgtatgccgacatgcagaccctg
gtgcatgaccacagcggcatcggcatcccggtgttcatcagcaacatcgatggtgtcgac
cagcgcgtcaagggttatggcaccaacccgctgggcggtttcatgggctatatgttcgct
gagcaagtctggcttgacgcttga
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