Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a3537
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Entry
PSEBR_a3537 CDS
T01472
Name
(GenBank) Putative Transcriptional factor, LacI family
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pba03000
]
PSEBR_a3537
Transcription factors [BR:
pba03000
]
Prokaryotic type
Helix-turn-helix
LacI family
PSEBR_a3537
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_38
MerR
HTH_Tnp_ISL3
DUF3853
SRP54
Motif
Other DBs
NCBI-ProteinID:
AEA69875
UniProt:
F2KIJ9
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Position
4349242..4350240
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AA seq
332 aa
AA seq
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MSNIREVARLAGVSVATVSRTLKSPERVLPETRDKVNAAVEQAGYRPNLMAVQFRSRRTG
NLVILVPTIANTFFARVISGAQQAAQAAGYRLLLCDTQGRAQIEREFAALVYAHQADGVI
QLRASDPFESMPAGAESLPLVNACEVVKNAPYPTISLDNRAAAQAMTEHLIGLGHRRIGI
IKGPRSSPLTLDRVAGYQDALSQAGIAVDPSLICHGDFTLKAGDDGAGAMLALVDRPSAL
FCENDEMAIGALRRIKQMGLRVPEDISLVGFDDIPFAAYCDPPLTTIAQPAEAFGQKAVE
MLIALIEKKPIAERHVVLPFELTVRGSTAPLA
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
ttgtccaacattcgtgaagtggcccggctggccggtgtgtcggtggccacggtgtccaga
accctgaaatcgcccgaacgggtgcttcccgagacgcgggacaaggtcaacgcggcggtg
gaacaggccggctatcgacccaacctgatggcggtgcaatttcgctcccggcgcaccggc
aacctggtgatcctggtgccgaccatcgccaacacgtttttcgcccgggtcatcagcggc
gcgcagcaggccgcgcaggcggcgggttatcgactgctgctgtgcgacacccagggccgc
gcgcagatcgagcgggaattcgccgcgctggtctacgcccaccaggccgacggggtgatc
cagttgcgcgccagcgatcctttcgaatcgatgcccgcaggcgctgaaagcctgccgctg
gtcaacgcctgcgaagtggtcaagaacgccccctacccaaccatcagcctcgacaaccgg
gccgccgcccaggccatgaccgagcacctgatcggtctcggccatcgccgcatcggcatc
atcaagggaccgcgcagcagccccttgaccctggaccgcgtggccggctaccaggatgcc
ctgagccaggccggtatcgccgtcgacccaagcctgatctgccatggcgacttcaccttg
aaggccggtgatgacggcgccggcgcgatgttggcgctggtcgaccggcccagtgcgttg
ttctgtgaaaacgacgagatggccatcggcgcactcaggcgcatcaagcaaatgggcctg
cgggtgcccgaggatatttccctggtggggtttgacgacatcccgttcgccgcctattgc
gacccgcccctgaccaccattgcgcaacctgccgaagcgtttggtcaaaaagcggtagag
atgctgattgccctgatcgagaaaaagccgattgccgaacggcatgtggtgttgccgttt
gagttgacggtgcgaggcagtacggcgcccctggcataa
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