Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a3571
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Entry
PSEBR_a3571 CDS
T01472
Name
(GenBank) Isocitrate dehydrogenase (NADP(+))
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Pathway
pba00020
Citrate cycle (TCA cycle)
pba00480
Glutathione metabolism
pba00720
Other carbon fixation pathways
pba01100
Metabolic pathways
pba01110
Biosynthesis of secondary metabolites
pba01120
Microbial metabolism in diverse environments
pba01200
Carbon metabolism
pba01210
2-Oxocarboxylic acid metabolism
pba01230
Biosynthesis of amino acids
pba04146
Peroxisome
Module
pba_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pba_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PSEBR_a3571
09102 Energy metabolism
00720 Other carbon fixation pathways
PSEBR_a3571
09106 Metabolism of other amino acids
00480 Glutathione metabolism
PSEBR_a3571
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PSEBR_a3571
Enzymes [BR:
pba01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
PSEBR_a3571
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Gene cluster
GFIT
Motif
Pfam:
Iso_dh
SHOCT_2
Motif
Other DBs
NCBI-ProteinID:
AEA69910
UniProt:
F2KIN4
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All DBs
Position
complement(4382611..4383867)
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AA seq
418 aa
AA seq
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MGYQKIQVPAVGDKITVNADHSLNVPDNPIIPFIEGDGIGVDISPVMIKVVDAAVQKAYG
GKRKISWMEVYAGEKATQVYDQDTWLPQETLDAVKDYVVSIKGPLTTPVGGGIRSLNVAL
RQQLDLYVCLRPVRWFEGVPSPVKKPGDVDMTIFRENSEDIYAGIEWKAGSAEATKVIKF
LKEEMGVTKIRFDEDCGIGIKPVSKQGTQRLARKALQYVVDNDRDSLTIVHKGNIMKFTE
GAFKEWAYEVAAEEFGATLLDGGPWMQFKNPKTGKNVVVKDAIADAMLQQILLRPAEYDV
IATLNLNGDYLSDALAAEVGGIGIAPGANLSDTVAMFEATHGTAPKYAGKDQVNPGSLIL
SAEMMLRHMGWTEAADLIIKGTNGAISAKTVTYDFERLMEGAKLVSSSGFGDALISHM
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggggtatcaaaagattcaggttccagccgtcggtgacaaaattaccgtcaatgcagac
cattctcttaatgttcccgacaacccgatcatccccttcatcgaaggcgacggcattggc
gtcgatatcagtccggtcatgatcaaggttgtggacgctgcggttcagaaggcctatggc
ggcaagcgcaagatttcctggatggaagtctatgccggtgagaaagcgactcaggtctac
gaccaggacacctggctgccccaggaaaccctggacgcggtcaaggattacgtggtttcc
atcaagggtccgctgaccacgccggtgggcggtggtatccgttcgctgaacgtggccctg
cgccagcagctcgacctgtacgtgtgcctgcgtccggtgcgctggttcgaaggcgtgcca
agcccggtcaagaagcctggcgacgtggacatgaccatctttcgcgagaactccgaggac
atctacgctggcattgagtggaaggccggttcggctgaagccaccaaggtcatcaagttc
ctgaaagaagaaatgggtgtgaccaagatccgtttcgacgaggactgcggcatcggcatc
aagccggtttccaagcaaggcacccagcgcctggctcgcaaggccttgcaatatgttgtc
gacaatgaccgcgattcgctgaccatcgtgcataaaggcaacatcatgaagttcaccgaa
ggtgccttcaaggaatgggcctacgaagtggcggccgaggagttcggcgcgaccctgctc
gacggcgggccgtggatgcagttcaagaacccgaagaccggcaagaatgtcgtcgtcaag
gacgccatcgccgatgcgatgttgcagcagatcctgttgcgtccggccgaatatgacgtg
atcgccaccctgaacctgaacggtgactacctgtccgacgccctggcggcggaagtgggt
ggtatcggtattgcgccaggcgccaacctgtccgacaccgtggcaatgttcgaagccacc
cacggtaccgcgcccaagtatgccggcaaggaccaggtcaaccctggctcgctgatcctg
tcggcggaaatgatgctgcgtcacatgggttggaccgaagcggccgacctgatcatcaag
ggcaccaacggcgcgatttcggccaagaccgtgacctatgacttcgaacgtctgatggag
ggcgccaagctggtgtcgtcttcgggcttcggtgatgccctgatctcgcacatgtaa
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