Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a3642
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Entry
PSEBR_a3642 CDS
T01472
Name
(GenBank) Putative 9-cis-epoxycarotenoid dioxygenase
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
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Gene cluster
GFIT
Motif
Pfam:
RPE65
Rrp44_CSD1
Motif
Other DBs
NCBI-ProteinID:
AEA69988
UniProt:
F2KIW2
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Position
4468919..4470367
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AA seq
482 aa
AA seq
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MSIPFPQTPEFSGALYTPSRVEAEVFDLEIEGILPASICGTFYQVAPDPQYPPMLGNDIF
FNGDGMVSRFNFANGKVSMRRRYVKTDRLLAQRREGRSLNGVYRNVYTNDPLAAKNNTTA
NTTVIPHNGVLLALKEDALPWAMDLETLETLGEWSFDGQIKAATFTAHPKLDPVTGNLLA
CSYEAKGDGTPDLAYFEISPDGKLLHEIWFQAPYAAMVHDFAVTERYVVFPLIPLTVDVD
RMKNGGPHFQWQPDLPQLFAIVPRNGRGQDVRWFKGPKDGFQGHTLNAFDEDDKVYVDMP
VTGGNIFYFFPQADGYVPPPETLAASLMRWTFDLNGAQEDVQPQPLTEYPCEFPRCDDRY
IGRKYQHGFLLAFDPERPYNPANGPIPFQFFNLLAHLDLQTGRTDAWFPGDSGCFQEPIF
IPRSADAEEADGYVVALLNLIAEGRSELVVLDTRDMASGPIARIRIPFRMRMSLHGCWAP
ID
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgagtattccattccctcaaacccctgaattttccggcgctctctatacgcccagccgc
gtggaagcagaggtgttcgatcttgagatcgaaggcatcctgcccgcttcgatctgtggg
actttttatcaggtggcgccagacccgcagtaccctcccatgctgggtaacgacattttc
ttcaacggcgacggcatggttagccgcttcaactttgccaatggcaaagtctcgatgcga
cgccgctacgtgaagaccgatcgcctgctggcccagcgccgtgaagggcgttcgctcaac
ggcgtctatcgaaacgtctacaccaatgaccccctcgcggcgaaaaacaacaccaccgcc
aacaccaccgtcatcccccacaacggcgtcctgttggcgctcaaggaagatgccctgcct
tgggcgatggatctcgaaaccctggagaccctcggcgaatggagctttgatgggcagatc
aaagctgcgacgttcaccgcccaccccaaactcgatccggtgacaggcaacctgctggcc
tgcagttatgaggccaaaggcgacggcacgcccgacctggcctatttcgaaatctcgccg
gacggaaagctgctgcacgagatctggttccaggcgccttatgcggccatggtgcacgat
ttcgcggtgaccgaacgctacgtcgtgttcccgttgattccgttgacggttgacgtcgat
cgcatgaaaaacggcgggccgcatttccagtggcaacccgacctgccccagctgttcgcc
atcgtgccgcgcaacgggcgtgggcaagatgtgcgttggttcaaggggcccaaggacggt
ttccaggggcatacgctcaatgcgttcgatgaggacgacaaggtgtatgtggacatgccg
gtcaccggcgggaatatcttctacttcttcccccaggccgacggctacgtaccaccgcct
gaaaccctggccgccagcctgatgcgctggaccttcgacctgaatggcgcgcaggaggac
gttcaaccgcagccactgacggaatatccctgcgagttcccacggtgtgatgatcgctac
atcggtcgaaagtaccagcatggtttcctgctcgccttcgatcctgagcgcccctacaac
ccggcgaatgggccaatccccttccagtttttcaacctgctggcgcacctggacctgcag
acaggccgcaccgacgcctggtttcccggcgacagcggatgcttccaggaacccatcttc
ataccgcgctcggcggatgcagaggaagccgatggctacgtcgtagccctgctcaacctc
atcgcagagggacgcagtgagctggttgtgctggacacccgtgacatggccagcgggccc
attgcccgcatcaggattcccttccggatgcgcatgtcgctgcatggctgctgggcacca
atcgattga
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