Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a3861
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Entry
PSEBR_a3861 CDS
T01472
Name
(GenBank) tRNA-pseudouridine synthase I
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pba03016
]
PSEBR_a3861
Enzymes [BR:
pba01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
PSEBR_a3861
Transfer RNA biogenesis [BR:
pba03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PSEBR_a3861
Prokaryotic type
PSEBR_a3861
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AEA70251
UniProt:
F2KJM5
LinkDB
All DBs
Position
complement(4719400..4720254)
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AA seq
284 aa
AA seq
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MANIDNPAAEMAADGFFRIALGVEYNGSRYRGWQRQASGVLTVQETLENALSKVADSPVS
LHCAGRTDAGVHACGQVVHFDTQVERSMKAWVMGANINLPHDVSVSWAKVMPAHFHARFK
AIARRYRYVIYNDQIRPAHLNEEITWNHRPLDVERMAEAAQYLVGVHDFSAFRAGQCQAK
SPIKELHHLRVTRHGKMIVLDIRASAFLHHMVRNIAGVLMTIGAGERPVEWIKEVLDSRI
RRSGGVTAHPFGLYLVQVEYRDEFELPERYIGPHFLTGFSELDG
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaacatagacaacccggccgccgaaatggcggccgacggctttttccggatcgcc
ttgggcgttgaatacaacggctcgcgctatcgtggctggcagcgccaggcttccggtgta
ttgactgtgcaggaaacccttgaaaatgccctgtccaaagtcgccgactcgcccgtgtcg
ctgcattgcgccggtcgtaccgatgctggtgtgcatgcctgcggccaagtggtgcatttc
gacacccaggtcgagcgctcgatgaaggcctgggtgatgggcgccaacatcaacttgccc
cacgatgtcagcgtcagttgggccaaggtgatgccggcgcacttccatgcacgcttcaag
gccatcgcccggcggtatcgctacgtgatctataacgatcagatccgcccggcgcacctg
aacgaagaaatcacctggaatcaccgcccgctggacgtcgagcgcatggccgaggccgcg
caatacctggtcggcgtccatgatttcagcgccttccgtgccggccagtgccaggccaag
tcgccgatcaaagagttgcatcacctgcgcgtgacccgtcacggcaagatgatcgtgctc
gacatccgcgccagcgcgttcctgcatcacatggtgcgcaacattgccggcgtgctgatg
accattggtgctggcgaacggccggtggagtggatcaaggaagtgctcgacagtcgcatc
cggcgctccggtggcgtcacggcgcacccgtttggcttgtacctggtacaggtcgaatat
cgcgatgaattcgagctgccggagcgttacatcgggccacatttcctcacgggcttctcg
gaactcgacggctga
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