Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a3872
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Entry
PSEBR_a3872 CDS
T01472
Name
(GenBank) tRNA-dihydrouridine synthase C
KO
K05541
tRNA-dihydrouridine synthase C [EC:1.-.-.-]
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pba03016
]
PSEBR_a3872
Transfer RNA biogenesis [BR:
pba03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
PSEBR_a3872
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Gene cluster
GFIT
Motif
Pfam:
Dus
His_biosynth
Motif
Other DBs
NCBI-ProteinID:
AEA70262
UniProt:
F2KJN6
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All DBs
Position
complement(4735136..4736095)
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AA seq
319 aa
AA seq
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MQIALAPMEGLVDNILRDVLTRVGGIDWCVTEFIRVNDRLLTPAYFHKLAPELLTGAQTA
AGVPLRVQLLGSDPVCLAENAALACELGSEVIDLNFGCPAKTVNKSRGGAVLLKEPELLN
EIVEHVRRAVPKHIPVTAKMRLGFDSPDGALVCATALAEGGAAHIVVHARTKVDGYKPPA
HWEWIPRVQEVVKVPVFANGDIWSVEDWRRCREISGVEDIMLGRGLVSRPDLARQIAAAR
AGEDVVEMSWAELQPMLQDFWVQVVEQLTPRQAPGRLKQWLAMLTRNYPEAVALFTALRR
ETDLDAVGHLLGVQRTEAA
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattgccctggcgcccatggaggggttggtcgacaacatcctgcgggatgtcctg
acccgtgttggcgggatcgactggtgtgtcaccgagttcatccgtgtcaacgaccgcctg
ctcacgccggcctatttccacaagctcgcccctgagttgctgaccggtgcccagacggct
gccggtgtgccgctgcgggtgcagttgctcgggtccgatccggtgtgcctggcggaaaac
gcggcgctggcgtgcgagttgggttcggaggttatcgacttgaacttcggttgcccggcc
aagaccgtgaacaaatcccggggcggggcggtgttgctcaaggagccggaactgctcaac
gaaatcgtcgagcacgtgcgccgtgcggtgccaaaacacatcccggtcaccgccaagatg
cgcctggggttcgatagcccggacggtgcgctggtgtgtgccacggcactggccgaaggc
ggcgcggcgcacatcgtggtgcatgcgcggaccaaggtcgatggctacaagcctccggcc
cactgggagtggattccccgggtgcaggaagtggtcaaggtgccggtgttcgccaatggc
gatatctggagcgtcgaggattggcgccgttgccgcgaaatcagcggtgtcgaagacatc
atgctcggtcgcggtctcgtttcccgtcctgacctggcccggcagatcgccgccgcccgg
gccggtgaggacgtggtcgagatgtcctgggccgagctgcagccgatgctccaggacttc
tgggtgcaagtggtcgagcagttgacaccgcgccaggccccgggccggttgaagcagtgg
ctggcgatgctgacccgcaattacccagaagcggtggcgctgtttaccgctttgcgccgg
gaaaccgacctggacgcggttggccatctgctgggggtgcagcgcaccgaagcggcctga
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