Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a3880
Help
Entry
PSEBR_a3880 CDS
T01472
Name
(GenBank) Glycine hydroxymethyltransferase (serine hydroxymethyltransferase)
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Pathway
pba00260
Glycine, serine and threonine metabolism
pba00460
Cyanoamino acid metabolism
pba00630
Glyoxylate and dicarboxylate metabolism
pba00670
One carbon pool by folate
pba00680
Methane metabolism
pba01100
Metabolic pathways
pba01110
Biosynthesis of secondary metabolites
pba01120
Microbial metabolism in diverse environments
pba01200
Carbon metabolism
pba01230
Biosynthesis of amino acids
pba01240
Biosynthesis of cofactors
pba04981
Folate transport and metabolism
Module
pba_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PSEBR_a3880
09102 Energy metabolism
00680 Methane metabolism
PSEBR_a3880
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PSEBR_a3880
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PSEBR_a3880
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PSEBR_a3880
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PSEBR_a3880
Enzymes [BR:
pba01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PSEBR_a3880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
DUF7113
DUF1815
Motif
Other DBs
NCBI-ProteinID:
AEA70270
UniProt:
F2KJP4
LinkDB
All DBs
Position
complement(4744908..4746179)
Genome browser
AA seq
423 aa
AA seq
DB search
MYDSSLTLETFDAELCEAIHNEECRQEDHVELIASENYASPLVMAIQDSVFTNKYAEGYP
GKRYYSGCEYVDVAERLAIERVKVLFDCDYANVQPHAGAQANAAVFLALLNPGDTVMGMN
LAQGGHLTHGNPSNFSGRHYKIVPYGLDPQTELIDYDEMERIALQTRPKMLIGGFSAYSR
YKDWARMRAIADKVGAIFWVDMAHVAGLVAAGEYPNPLPHAHVVTSTTHKTLRGPRGGVI
LSKGQDDTFYKKLDSAVFPGVQGGPLMHQIAAKAVAFKEALAPGFKTYQKQIVINARAMA
AVLQQRGYRIVSGGTDNHMMLIDLSDKPYTGKDADAALSNAYITANKNSVPNDPRSPFVT
SGLRIGTPAVTTRGFGVPECEQLAGWLCDVLDALESGGSEQVAHHVREQVVALCRRHPVY
RQR
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgtacgactcatccctgacccttgaaacgttcgacgccgagctatgtgaggcgattcac
aacgaagaatgccgccaggaagatcacgtcgagttgatcgcctccgagaactacgccagc
ccattggtgatggcgattcaggactcggtattcaccaacaagtacgccgaaggttacccg
ggcaagcgctactacagcggttgcgagtatgtcgacgtggctgagcgcctggccatcgag
cgggtcaaggtgctgttcgattgcgattacgccaacgtccagcctcatgccggggcccag
gccaacgccgctgtgttcctggcactgctcaatcctggggacaccgtgatgggcatgaac
ctggcccagggtggtcacttgactcacggcaacccctccaatttctccggccgtcattac
aaaatcgttccctacggtctcgacccgcagacggagttgatcgactacgacgaaatggaa
cgcatcgcccttcaaacccggccgaagatgttgatcggtggtttttccgcttattcgcgg
tacaaggactgggcacgcatgcgggccattgccgacaaggtcggagcgattttctgggtc
gacatggcccacgtcgccggtctggtggcagcgggtgagtatccgaacccgttgccccac
gcccatgtggtcaccagtacgacccacaagaccctgcgtggcccacggggcggggtgatc
ctgtccaagggacaggacgatacgttttacaagaagctcgactcggcggtgttccctggt
gtccagggcggtccgttgatgcaccagatcgcggccaaggccgttgccttcaaggaagcg
ttggcgcccgggttcaagacctatcagaagcagatcgtgatcaacgcccgggccatggct
gccgtgttgcagcagcgtggctacagaattgtctccggggggaccgacaaccacatgatg
ttgatcgacctgtccgacaagccttacaccggcaaggacgccgatgccgccctgagtaat
gcctacatcacggccaacaaaaactcggtgcccaacgacccccgttcaccgttcgtaacc
tcagggctgcgcatcggcaccccggcagtgaccactcgcgggtttggagtgccagagtgc
gagcaactggcaggttggctgtgtgatgtgcttgacgcgctggaatccggcggcagcgag
caggttgcgcatcatgtgcgcgaacaggtggtggcgctgtgtcgtcgtcatcctgtatat
cggcagcgctaa
DBGET
integrated database retrieval system
