Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a4300
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Entry
PSEBR_a4300 CDS
T01472
Name
(GenBank) Hypothetical protein
KO
K15125
filamentous hemagglutinin
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pba00536
]
PSEBR_a4300
Glycosaminoglycan binding proteins [BR:
pba00536
]
Heparan sulfate / Heparin
Microbial pathogens
PSEBR_a4300
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPS
Fil_haemagg_2
ESPR
AHH
DgcQ_link
FIMAH
Motif
Other DBs
NCBI-ProteinID:
AEA70708
UniProt:
F2KC55
LinkDB
All DBs
Position
complement(5229884..5239108)
Genome browser
AA seq
3074 aa
AA seq
DB search
MNKHLYRIVFNKARGLLMVVAENVTSQVKAPGTRSGPTTSAAACTATLGALRFALMTAIG
LVSLSVAPAWAGTIVADPGAPAGQQPMVIQSANGTPQVNIQAPSAGGVSRNTYNQFDVDS
RGVILNNGTGNSQTKLGGWIEGNPMLGNGSARVILNEVNASNPSQLRGYVEVAGQRAEVV
IANPAGITCNGCGFINADRATLSTGRAQLENGRITGYTVQDGTINIEGKGLDARETDYAD
LIARSVQVNAGVWANDLKVTAGRNQVNADNTQATPLPGTEGDKPTVAIDVAKLGGMYAGK
IMLVGTESGVGVRNAGQIGAMAGEVVISADGKLQNQGAISSATATRINAASVENSGTLYA
KGDLGLDSTGDIDNSGTVASQNHTTLTAKNIRSTTASSLAAGVGADGKLGSSGNLAFRAT
TVKAQGQNLAGGDVSVEAADLDLSSSQTLGQNVTLTASGGDANLSGSQVDATQVLTAKAT
NTLRTNGAKVTAGNLQLGARDVANVGGELVQTGTADASIKATATLDNGGGRIASNGNNLK
LGADRLDNSKGKVEHAGKGTLDIQASQLAGSKGTLASNGTLSVKAREVVVDDGLTQGQQI
TLDTTTLSNQRGRILQTGAQPLQVTARERFDNQAGQVSSPGAVVLKVGTFNNQDGKVLAT
DNGALTVTADKEVNNDGGTLAASGTTKVSGEALDNTQGTVSAGGELYATFDRLNNIGGTL
AATQRMEIIAGQLNNTNGVLGSVKSGLLVSVSADALNNSGGRLEALGDIDLSAQGLNNQG
GVISGQALDLDSHGLLMDNSQGTLNAGATLDLRSGELRNAAGLIQAKGKLFIDTDSQALN
NLQSGTTQGISGQGAVEIHSAHFNNSGGFLGAKGALVLKATDLTNGSGGQIIGEKTVQVE
GARVDNRGGQLQGLGDVQLVLGDTLNNQGGLVRSAGMLGVIAGVLDNSATQGANQGLEGR
AMSLALDTFGNQAGAVRADQGLSIGVSQTLDNQGGLISAGAGLTITDRDPAQRRQAVHNL
DGTLLAGSLLSLNAAYYAGTGRALSLGDLTFSLQSGLDLSGQIQANNKIDLSTEGAFNNS
GKLLAGNLLLVRSQTLDNAASGEISAGQVRLSINDSLTNRGLIDGQQVRVQALSLNNLGT
GRLYGDRLAIATSALSNRDENGSAATIAARESLDIGTGTLDNREQALIFSAGDLAIGGAL
SATDKAQDRAQLLTNASATIEALGNLSLDVQNVRNTNEHFSTQQVEVSRTALQDFQLSGS
PNRYQGDQISVNNDEVLHLTTPEGRKDNWNRYDYTRVVQETQIATSAPAQILSGGTMQIN
AGDVLNDKSRIIAGGLLQANITSLTNTELTGQRTTTDSGTVSNFYRIQRKGRDRQGTAVT
AYTPAPLIQDITLQPTVFAQNAAGNGTGTQISARATQGVGEQIAATGTVSAPVGRTYQVA
PIVQVAAQTTLNNKGVAEQIRSGGPSLALPNNSLFTTNPQNTSSYLIETDPRFASYRTWL
SSDYMLQRLQVDPALTQQRLGDGFYEQKLIREQIAQLTGRRFLDGYANDEAQYRALIDNA
VTVASQWQLVPGVALTSEQMAQLTSDIVWLVQKQVTLANGDTRNVLVPQVYVRVQEGDLN
GSGALIAGQQLNLNIAGDLVNSGSLAGRSVMAITAQNIENLGGRIQADKVSLAARENLNN
LGGLIGAVDSLSVKAGQDINVISSSRDSSSAQGTRTNLSRVAGLFVSGAQGTMGMSAGND
LNLTGAQVVNAGKGGSTLLEAGKNINLATVGEAHEQALTWNSSNWRKDASQTEVGSQVQG
QGDVRLSAGQDLNARAAHVTSEQGAVFAEAKRDVNLTAGQNYQFADEAHKVKGSNGMFSS
KTTTTRDTISQTSVEGSTLSGEQTYVQAGRDINLKGSNVVSTTQTVLVADNNVNIEADTA
SSSERHDKSVKKSGLFSGGGIAVTLGSQQQSVKDLTTEHTAVASTVGSTAGDVLIEAGKG
YRQVGSQVSAPQGNIDVTAQTIDVVEARNTRERERETLFKQTGFTLTVTNPVISAIQTSQ
QMKRASEKTDDGRMKALAAATAVLAANNAATAVAMDPGAVGGINISLSLGTKKNESTTTY
TSDSAAGSTMTAGNDVRLRATGAGAASDITVQGSDIKAGRNASLLADGDINLLAARNIDK
QETDSKGSSASIGIGFSLGARNGFTLDLGASGSRGQADGDGLTHTNTHVQAGNQLLLSSG
GDTNLKGAVASGKQVLADIGGDLNIESLQDTNTYVVDEKSLGVGISLCIPPFCLGMSSVS
GASGSFGATDIDSNYASVTEQSGIKAGDDGFDIRVGGNTDLVGAVIASSDKAVQDGKNRL
VTASLTSRDIKNKAEYDASTVSVGGGYREVGKDQQGNATSGGTQTPGTDLPKNDNDLSAT
MPIAISASDDASSVTRSGISGGTIVISNDAEQQKRTGKNGEQTIASLNRDVSSDRDTTNT
LKPIFDEDEIRAGFEIVGAFANEASTLLANKAKEVDLKRKQAEAAQTAALDPNAKLTDTE
RLALLGNAQRLNAEASGIADKWGAGGTYRQITTALVGAASGNISGGNSAFVQGLVVNYVQ
QQGAGYIGDLVADGKLTEGSPLHAALHGIVACAGAAASSQSCGSGAAGAAASSLLTGLFS
EASPDESESQREAKRNLIVSIVTGLAATSSSLDPATATSAAGAAVDNNWLATQQLVQAEK
EYAAADGLGAKAQVIAKWAYINQKQDVLTRFGVGKGLVQAGWSDVEGLAQFLLHPVDGIN
GLKALVNDPEARKQFGDGVVNELNAKLDRVKDALENGGDDRAVQLGQDIGELVWQVGSIA
TGVGGAAKGGVALAKAGIKVGAEGLEKMADMARLEKLAKNVDQLPERIPVEPVKPNTSNA
GAETGGQHVESPLALPAPARHRVPDGYTVAENANGTVTVTGPRGGIYNSTGRYTNDGKPI
YRDNNGGFVSLEGGRTPVSAPPDYSSVPVHHICTNKCNAGANGQIAWSKQFQKFFDGSDL
DINKATENLVAVPGHRGPHPQSYHQYVYGSLDDATRGLEPGTAQYKSAVVNTLNRIKVEA
VTPGSSVNRWLTGS
NT seq
9225 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcatctgtaccgaatcgttttcaacaaggcccgcggactgctgatggtcgtg
gccgagaacgtcaccagccaagtcaaggcgccggggacccgctccgggccgacgacgagc
gcagcggcttgcacggcgacactcggggcgttgcgctttgccttgatgaccgcgattggc
ctggtgtccttgagcgtggcgccggcctgggctggaaccatcgtcgccgatcctggcgct
ccggccggccagcaacccatggtgatacaaagcgccaacggcacgccgcaggtcaatatc
caggcccccagcgccggcggtgtctcgcgcaacacttacaaccagttcgacgtcgatagc
cggggggtgatcctcaacaacggcacgggcaatagccagacgaaactgggcggttggatc
gaaggcaacccgatgttgggcaatggcagcgcgcgggtcatcctcaacgaagtcaacgcc
agcaatcccagtcaactgcgcggttacgtcgaagtcgccggccagcgcgccgaagtggtg
atcgccaacccggccggcatcacctgcaacggttgcggcttcatcaacgccgaccgggcc
accctcagcaccggccgggcgcagttggagaacggtcgcatcaccggctacaccgtgcag
gacggcaccatcaatatcgaaggcaaaggcctggatgcccgcgagaccgactacgcggac
ctgattgcccgctcggtgcaggtcaacgccggggtgtgggccaacgacttgaaggtcacc
gccggacgtaatcaggtcaatgccgacaacacccaggccacgccgctgccaggcaccgag
ggagacaaacccaccgttgccatcgacgttgccaagctcggcggcatgtatgccgggaag
atcatgctggtgggcaccgaatccggcgtgggtgtgcgcaacgccgggcagatcggcgcc
atggctggcgaggtcgtgatcagcgccgacggcaaattgcaaaaccagggtgcgatcagc
agcgctacagcgacccgaatcaatgccgccagtgttgaaaacagcggcacactctacgcc
aagggcgacctgggcctcgacagtaccggtgacatcgacaacagcggcaccgttgccagc
cagaaccacacgacactgaccgccaagaacattcgcagcaccacggcctcgagcctggcg
gcgggcgtcggggcggacggcaagttgggcagcagcggcaacctcgcgtttcgggccacc
acggtcaaggcgcaaggccagaaccttgccggcggcgatgtcagcgtcgaggccgctgac
ctggacctgagcagcagccagaccctgggtcaaaacgtcaccctgacggccagcggcggc
gatgccaacctcagtggcagtcaagtcgatgcgacccaggtgctgactgccaaagcgacc
aataccctgcgcaccaatggggccaaggtcaccgctggcaacctgcaattgggcgcgcgg
gatgttgccaatgtcggcggtgagctggtgcagaccggcaccgccgacgcgtcgatcaaa
gccactgccacgctcgacaacggcggtggccgtattgcctccaacggcaacaacctgaag
cttggcgccgatcgcctcgacaacagcaagggcaaggtcgagcacgccggcaaaggtacc
ttggacatccaggccagccagttggctggcagcaaaggtaccctggcgagcaatggcaca
ttgagcgtcaaggcccgcgaggtggtggtcgatgatggcctgactcaaggccaacagatc
acgctcgacaccacgaccctgtccaaccagcgcggacgcattctccagaccggcgcgcag
cccttgcaggtcaccgcccgtgaacgcttcgacaatcaggccggacaagtcagcagtcca
ggggcggtggtcctgaaggtcgggacgtttaacaaccaggacggcaaagtcctcgccacc
gataacggtgcgttgaccgtcacggccgacaaagaggtcaataacgacggcgggacgctg
gccgccagcgggacgacaaaggtcagcggcgaggcgctggataacacccaaggcaccgtg
agtgctggcggtgagctgtacgcgacgttcgaccgcttgaacaatatcggcggcacgctc
gccgccacccagcgcatggaaatcatcgccgggcagttgaacaacaccaacggcgtgctg
ggctcggtgaagtccggcttgctggtcagcgtctcggccgatgcattgaacaacagcggc
gggcgtcttgaagcgctgggcgatatcgatctgtcggcccagggcctgaataaccagggc
ggggtgatcagtggccaggccctggacctggacagccacggcctgctgatggacaacagc
cagggcacgttgaatgccggtgcgaccctcgacctgcgcagcggtgaactgcgcaacgcg
gcgggcctgatccaggccaagggcaagctgttcatcgacaccgacagccaggcgctgaac
aaccttcagtccggcaccacccaaggcatcagcggccagggtgcggtggaaatccacagc
gctcatttcaacaacagtggcggcttcctcggcgccaaaggcgcgctggtgctcaaggcc
accgaccttaccaacggcagtggtggccagatcattggcgaaaaaaccgtacaggtcgaa
ggtgcccgggtggataaccgcggcggtcaattgcaaggcctcggcgatgtccagttggtg
ctgggggatacgctcaacaaccagggcggactggtgcgcagcgcgggaatgctgggcgtg
attgccggcgtgctcgacaacagcgccacccaaggtgccaaccagggccttgaagggcgt
gccatgagcctggcgctcgacaccttcggcaaccaggccggtgccgtgcgcgccgaccaa
ggattgtccatcggcgtcagccaaacgctggataaccagggcggcctgatttccgcggga
gccggcctgaccatcactgatcgcgatccggcgcagcgtcgccaggcagtgcacaacctc
gacgggaccttgctcgctggcagcctgttgtcccttaacgcggcctattacgcaggcacc
ggtcgagccctgagcctgggcgacctgacgttcagcctgcaaagtggcctggacctgagt
ggacagatccaggccaataacaagatcgacctgagcaccgagggcgctttcaacaacagc
ggaaaactgttggcaggcaatctcctgctggtgcgctcgcagacgctggacaacgccgcc
agcggcgagatcagcgccggccaggttcgcctgagcataaacgacagcctgaccaaccgt
ggcctgatcgacggccagcaagtgcgtgtgcaagcgctgtcgctcaacaacctgggcacc
ggacgtctgtacggtgatcgactggcgatcgccacttcggcgctgagcaaccgtgatgag
aacggcagcgccgcgaccatcgccgcccgtgagtcgctggacattggtaccggcaccctg
gataaccgcgagcaggcgctgatcttcagtgccggggacctcgccatcggtggtgcgctg
agtgcgactgacaaggcccaggaccgtgctcaactgctgaccaacgccagtgcgaccatc
gaagccctcggcaacctgtcgctcgatgtgcaaaacgtgcgcaacaccaacgaacatttc
agcactcagcaagtggaagtcagccgcaccgccttgcaggacttccagctcagcggttcg
ccgaaccgctaccagggcgaccagatctccgtgaacaacgacgaggtccttcacctgacc
accccagaggggcgcaaagacaactggaaccgctacgactacacccgcgtggtgcaggag
acccagatcgccacctcggcaccggcgcagatcctgtctggtgggacgatgcagatcaac
gcaggggatgtgctcaacgacaagagccgcatcattgccggtgggttgttgcaggccaac
attaccagcctgaccaacaccgaactgaccggccagcgcaccactaccgacagcggcacc
gtcagcaatttctatcgcatccagcgcaagggccgggaccgtcagggaacggccgtcacg
gcctacacgccagcccccttgatccaggacatcaccctgcagccgaccgtgttcgcccag
aacgccgccggcaacggtaccggcacccagatcagcgcccgcgccacacagggcgtcggc
gagcagatagccgccacgggcacggtcagcgccccggtcggcagaacctatcaagtggcg
cctatcgttcaggtcgcggcccagaccaccctcaacaacaagggcgtggccgagcagatt
cgcagtggcgggccatccctggccttgccgaacaacagcctgttcaccaccaatccgcag
aacaccagcagctacctgatcgaaaccgacccgcgttttgccagctatcgcacctggctg
tcgtcggactacatgttgcagcgcttgcaagtcgacccagccctgacgcaacaacgtttg
ggcgacggcttctacgaacagaaattgattcgtgaacagatcgcgcaactcaccggccga
cgtttccttgacggctacgccaatgacgaagcgcaatatcgtgccctgatcgacaacgcc
gtgaccgtcgccagccaatggcaactggtgcccggcgtggccctgacctccgagcagatg
gctcagttgaccagtgacatcgtctggctggtgcagaagcaagtcaccctcgccaatggt
gacacccgcaacgtgctggtgccgcaggtgtacgtacgggtccaggaaggcgacctcaac
ggctccggtgccctgattgccgggcagcagttgaacctgaacatcgccggcgacctggtc
aacagtggcagcctggccgggcgcagtgtcatggcgatcaccgcgcagaacatcgagaac
ctcggtgggcgcatccaggccgacaaggtatcgctcgccgcgcgggaaaacctcaacaac
ctcggcggcctgatcggtgccgtggacagcctgtcggtcaaggccgggcaggacatcaac
gtcatctctagcagccgggacagcagcagtgcccaaggcacccgcaccaacctgtcgcgg
gtggccgggctgttcgtcagcggtgcccagggcacgatggggatgagcgccggcaacgac
ctcaacctcaccggagcccaggtggtcaatgctggcaagggcggcagtacgttgctggag
gcgggcaagaacatcaacctggccaccgtcggcgaagcccacgagcaagcgctgacctgg
aacagcagcaactggcgcaaggacgccagccagaccgaagtcggctcacaggtccaaggg
cagggcgacgtgcgcttgagcgcgggccaggacctcaacgcccgcgccgcccatgtcacc
agcgagcaaggcgcggtgtttgccgaggccaagcgcgacgtcaacctgaccgccggccag
aactaccagttcgctgatgaagcccacaaggtcaagggcagcaacgggatgttctccagc
aagaccaccaccacccgcgacaccatcagccagacctcggtcgaaggctccaccctgagc
ggcgagcagacctatgtgcaggccggtcgcgacatcaacctcaagggcagcaacgtggtg
tccacgacccagacggtgctggtggcggacaacaacgtcaacatcgaagccgacaccgcc
agcagcagcgaacgccacgacaagtccgtgaagaaaagcggcctgttcagcggcggtggc
atcgccgtcaccctgggcagccagcaacaaagcgtcaaggacctcaccaccgagcacacg
gccgtggccagcaccgtcggctcgaccgctggcgatgtgttgatcgaagcgggcaagggc
taccgtcaggtgggcagccaggtgtcggcgccacaaggcaacatcgacgtcacggcgcag
accatcgacgtcgtcgaggcgcgcaacacccgcgagcgcgagcgtgaaaccctgttcaag
cagaccgggttcaccctcaccgtgaccaacccggtgatcagtgcgatccagacgtcccag
caaatgaaacgggcgtcggagaaaaccgacgacgggcgcatgaaggccctggctgccgcc
actgccgtgctggcggccaacaatgccgccactgccgtggcgatggacccgggcgcggtg
ggcgggatcaacatcagcctgtcgctgggcaccaagaagaacgaaagcaccaccacctac
accagcgacagcgcggctggctcgaccatgaccgctggcaacgacgttcgcctgcgcgcc
acgggagctggcgctgcgagcgacatcaccgtgcaaggcagcgatatcaaggctggccgc
aacgccagcctgctggcggacggcgatatcaacctgctcgccgcgcgcaatatcgacaag
caggaaaccgacagcaaaggcagcagcgcgagcatcggcatcggcttttccctcggtgca
cgcaacggcttcaccctggacctgggtgcctccggcagccgcggccaggcggatggcgat
gggctcacccacaccaatacccatgtccaggcgggcaaccagttgttgctgtcctcgggc
ggtgacaccaacctcaaaggcgcggtggcgagcggcaaacaggtgttggccgatatcggc
ggcgacctgaacatcgaaagcctgcaagacaccaacacctacgtggtcgatgagaagagc
ctgggcgttggcatcagcctctgcattccgccgttctgcttaggcatgagttcggtcagc
ggtgccagcggcagcttcggtgccaccgatatcgactccaattacgccagcgtcaccgag
caatcgggcatcaaggccggggacgacgggttcgacattcgggtgggtggcaacaccgac
ctggtcggcgctgtcatcgccagcagcgacaaggccgtgcaggacggcaagaatcgcctg
gtcaccgccagcctcaccagtcgcgacatcaagaacaaggccgagtacgacgccagcacc
gtcagcgtcggcggcggctatcgcgaagtcggcaaggaccagcagggcaacgccaccagc
ggcggcacgcaaacccctggcaccgacctgccgaagaacgacaacgacctcagcgccacg
atgccgatcgccatcagtgccagcgacgacgccagcagcgtcacccgcagcggcatcagt
ggcggcaccatcgtcatcagcaacgacgccgagcaacagaagcgcaccggcaagaacggc
gagcaaactatcgccagcctcaaccgcgatgtctccagcgaccgcgacaccaccaacacg
ctcaagccgatcttcgacgaagacgaaatccgtgccggtttcgagatcgtcggggcgttc
gccaacgaagccagcaccttgctcgccaacaaggccaaggaagtcgacctcaagcgcaaa
caggccgaggcggctcagacagcggccctggaccccaacgccaaactcaccgacaccgaa
cgcctggcgctgctcggcaacgctcagcgcctgaacgccgaagccagcggcatcgccgac
aagtggggcgcgggcggtacctaccgacaaatcaccaccgccctggtgggcgcggccagc
ggcaacatcagcggcggcaacagtgccttcgttcaagggctggtggtcaattacgtgcag
cagcaaggtgccggctacatcggcgacctggtggcggacggcaaactcaccgaaggctcg
ccgctgcacgccgccctgcacggcatcgtcgcctgcgcgggcgccgccgccagcagccag
agctgtggcagcggtgccgcaggcgcggcggcgtcgagcctgctcaccggcctgttctcc
gaagccagccccgatgaaagcgaatcccaacgtgaggccaagcgcaacctgatcgtcagc
atcgtcaccgggctggccgccactagttcctcgctcgacccggccaccgccaccagcgcg
gccggggcagcggtggacaacaactggctggcgactcagcagctggttcaggcggagaag
gaatacgccgcggctgacggcttaggggccaaggcgcaagtgatcgccaagtgggcgtac
atcaaccagaaacaagacgtgctgacccgcttcggcgtgggcaaaggcttggtgcaggcg
ggttggagcgacgtcgaaggcttggcgcaattcctccttcacccggttgacggaatcaac
ggcctaaaagccctggtcaacgacccagaggcccgcaagcagttcggcgatggcgtggtc
aacgaactcaacgccaaacttgaccgcgttaaagacgcactggaaaacggtggtgatgat
cgcgccgtgcaactggggcaggacattggcgaactcgtctggcaggttggcagtattgct
acgggtgttggcggggcggccaagggtggggtggcgttggcgaaagccgggatcaaggtg
ggggcggaagggcttgaaaagatggccgatatggctagactcgaaaagctcgcgaaaaat
gtcgatcagttgccagaacgtattcctgtcgagccagtaaaaccaaatacttccaatgca
ggagcggagactggcgggcaacatgtcgaaagtccgctggcgttaccagcacctgcaagg
cacagggttcctgacggctatacagttgccgaaaatgcgaacggaactgtcaccgtaacc
gggccacgcggtggtatctataactctacaggtcggtatacaaatgacggtaagccgatt
tatcgggataataacggcggctttgtatcgctcgaaggtggacgtacacctgtttccgcg
ccgccggattattccagcgttcctgtacaccatatctgcactaataaatgtaatgccggg
gcaaacggacagattgcttggtctaagcaattccaaaaattctttgatggttccgatctg
gatattaataaggcaactgaaaatctggtcgcggttccgggtcatagaggtccacaccct
caaagttatcatcaatatgtttatggtagcctcgacgatgctacgcgagggttggaaccc
ggtaccgcgcaatataagagtgcagtggtgaatactttaaataggatcaaggttgaagca
gtcacgccgggaagctcggttaatcgatggcttacaggaagctga
DBGET
integrated database retrieval system
