Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a4374
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Entry
PSEBR_a4374 CDS
T01472
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Pathway
pba03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PSEBR_a4374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pba03019
]
PSEBR_a4374
03110 Chaperones and folding catalysts [BR:
pba03110
]
PSEBR_a4374
03029 Mitochondrial biogenesis [BR:
pba03029
]
PSEBR_a4374
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pba04147
]
PSEBR_a4374
Enzymes [BR:
pba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PSEBR_a4374
Messenger RNA biogenesis [BR:
pba03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PSEBR_a4374
Chaperones and folding catalysts [BR:
pba03110
]
Heat shock proteins
HSP60 / Chaperonin
PSEBR_a4374
Mitochondrial biogenesis [BR:
pba03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PSEBR_a4374
Exosome [BR:
pba04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PSEBR_a4374
Exosomal proteins of other body fluids (saliva and urine)
PSEBR_a4374
Exosomal proteins of breast cancer cells
PSEBR_a4374
Exosomal proteins of colorectal cancer cells
PSEBR_a4374
Exosomal proteins of bladder cancer cells
PSEBR_a4374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AEA70783
UniProt:
F2KKQ1
LinkDB
All DBs
Position
complement(5318679..5320322)
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKEVKFGDSARKKMLAGVNVLADAVKATLGPKGRNVIIEKSFGAPTITKDGVSVAKEI
ELKDRFENMGAQLVKDVASRANDDAGDGTTTATVLAQSIVNEGLKAVAAGMNPMDLKRGI
DKATIAIVKELKALSKPCADTKAIAQVGTISANSDNSIGDIIAEAMEKVGKEGVITVEEG
SGLENELSVVEGMQFDRGYLSPYFVNKPETMTAELDGPLILLVDKKISNIREMLPVLEAV
AKAGRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAVLTGGTV
ISEEIGLSLESTTLEHLGNAKRVILSKENTTVIDGAGVETDIQARVLQIRQQVADTSSDY
DREKLQERLAKLSGGVAVIKVGAGSEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALV
RALQAISELKGDNDDQNVGIQLLRRAVEAPLRQIVANSGDEPSVVVDKVKQGTGNYGYNA
ATGEYGDMIEMGILDPAKVTRSALQAASSIASLMITTEAMIAEIKEDAPAGGGMPDMGGM
GGMGGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagaagttaaattcggcgattccgcccgcaagaaaatgctcgccggtgtc
aacgtcctggctgacgcagtaaaagcgaccctcggcccgaaaggccgtaacgtgatcatc
gagaagagcttcggcgctccgaccatcaccaaggacggcgtttccgtagccaaagaaatc
gagctgaaagaccgcttcgaaaacatgggcgcgcaactggtcaaagacgttgcctctcgt
gccaacgatgacgccggcgacggcaccaccaccgctaccgtcctggctcaatcgatcgtc
aacgaaggcctgaaagccgtcgctgccggcatgaaccctatggacctcaagcgcggcatc
gacaaggcgaccatcgccattgtcaaagagctcaaagccctgtccaagccatgcgctgac
accaaggcaatcgctcaggtcggcaccatctccgccaactccgacaactccatcggcgac
atcattgccgaagccatggaaaaagtcggtaaagaaggcgtgatcaccgttgaagaaggc
tcgggcctggaaaacgaactgtcggttgtagaaggcatgcagttcgaccgtggctacctg
tccccgtacttcgtcaacaagccagagaccatgactgccgagctcgacggtccgctgatc
ctgctggtcgacaagaagatctccaacatccgcgaaatgctgccagtgctggaagccgtt
gccaaagccggccgcccactgctgatcgtggctgaagacgttgaaggcgaagccctggcg
accctggttgtgaacaacatgcgcggcatcgttaaagtcgcagccgtcaaggctccaggc
tttggcgaccgtcgcaaggccatgctgcaggacatcgccgtactgaccggcggtaccgtt
atctccgaagagatcggcctgagcctggaaagcaccaccctggagcacctgggtaacgcc
aagcgcgtgatcctgtccaaggaaaacaccaccgtgatcgacggtgccggcgtcgagact
gacatccaggctcgcgttctgcagatccgtcagcaagtggccgacacttcgtccgactac
gaccgtgaaaaactgcaagagcgcctggccaagctgtccggcggcgttgcagtgatcaag
gttggcgccggttccgaagttgaaatgaaagagaagaaagcccgcgttgaagacgccctg
cacgctacccgtgcagccgtcgaagaaggcgtggtacctggcggcggcgtggcactggtt
cgcgctctgcaggctatctccgagctgaaaggcgacaacgatgaccagaacgtgggcatc
cagttgctgcgtcgcgctgtagaagccccgctgcgccagatcgttgccaactccggcgac
gagccaagcgttgtggtcgacaaggtcaagcagggtacgggtaactacggttacaacgct
gctaccggcgaatacggcgacatgatcgaaatgggtatcctggacccagccaaagtgact
cgttcggctctgcaagcggcttcgtcgattgccagcctgatgatcaccaccgaggcgatg
atcgctgaaatcaaggaagacgctccagctggcggcggtatgccagacatgggcggcatg
ggtggcatgggcggcatgatgtaa
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