Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a4406
Help
Entry
PSEBR_a4406 CDS
T01472
Name
(GenBank) Putative transcription factor, DeoR family
KO
K02444
DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pba03000
]
PSEBR_a4406
Transcription factors [BR:
pba03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
PSEBR_a4406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
HTH_PafC
HTH_20
HTH_Crp_2
Sigma70_r4_2
MarR
Put_DNA-bind_N
GntR
Sigma70_r4
MarR_2
HTH_28
HTH_Mga
TFIIE_alpha
Motif
Other DBs
NCBI-ProteinID:
AEA70815
UniProt:
F2KKT3
LinkDB
All DBs
Position
5349486..5350241
Genome browser
AA seq
251 aa
AA seq
DB search
MNLPPRQQQILELVRERGYVSIEEMAQLFVVTPQTIRRDINQLAEVNLLRRYHGGAAYDS
SVENTAYAMRADQMRDEKQRIAEAIAAQIPDHASLFINIGTTTESIARALLNHNHLKVIT
NNLHVASILSAKDDFEVLIAGGNVRRDGGVVGQASVDFINQFKVDFALVGISGIDEDGSL
LDFDYQEVRVSQAIIANARQVLLAADSSKFGRNAMVRLGPISLIDCLVTDQQPVPALAQL
LSQHKIRLEVV
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgcctccccgccagcagcaaatcctcgaactggtccgcgaacgcggctatgtc
agcatcgaggaaatggcgcagctattcgtcgtcaccccgcaaaccattcgccgcgatatc
aatcaactggcggaagtgaacctgctgcgtcgctaccacggcggcgccgcctacgattca
agcgtggaaaacaccgcctacgccatgcgcgccgatcagatgcgcgacgagaagcaacgc
atcgccgaagccatcgccgcccagatccccgatcatgcctcgctgttcatcaacatcggc
accaccaccgaatccattgcccgggcgctgctcaatcacaaccatctgaaggtcattacc
aataacctgcatgtggcgtcgatcctcagcgccaaggacgacttcgaagtcctgatcgcc
ggcggcaacgtacgacgtgacggcggcgtggtaggccaggccagcgtcgacttcatcaac
cagttcaaggtcgacttcgccctggtgggcatcagcgggatcgatgaagacggcagcctg
ctggacttcgactaccaggaagtgcgggtctcccaagccatcatcgccaacgcccggcaa
gtgctgctggcggcggactccagcaaattcgggcgcaacgccatggtccgcctggggccc
atcagcttgatcgactgcctggtgaccgaccagcaaccggtgccggctttggcgcaattg
ctgagccagcacaagattcggctggaagtggtctga
DBGET
integrated database retrieval system
