Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a4450
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Entry
PSEBR_a4450 CDS
T01472
Name
(GenBank) Putative outer membrane porin, OprD family
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Pathway
pba01501
beta-Lactam resistance
pba02020
Two-component system
Module
pba_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PSEBR_a4450
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PSEBR_a4450
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pba02000
]
PSEBR_a4450
01504 Antimicrobial resistance genes [BR:
pba01504
]
PSEBR_a4450
Transporters [BR:
pba02000
]
Other transporters
Pores ion channels [TC:
1
]
PSEBR_a4450
Antimicrobial resistance genes [BR:
pba01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
PSEBR_a4450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
AEA70861
UniProt:
F2K506
LinkDB
All DBs
Position
5395751..5397034
Genome browser
AA seq
427 aa
AA seq
DB search
MRVMKWSMIALAVSAGTSQFAMASSQEESKGFIEDQSLTAKTRLEYMNRDQRNGGGNIAL
PGGGFKNGYREDTGISELLIYKSGFTQGTIGVGVDAFAGGTARLDGGEGRQGNNLFASDD
EGKPEHTQSKAGAAVKFRLSDTVLKYGTQQTESPVFSTDDSRLLPEFATGTLITSKEIKG
LELSAGHFTAMSGQQNMGHDSINGAHSKGLTSADIAGATYQFTDNFVAGVAASDVDDYFK
KQYVNLNYTLPIDDSQALNFDFNGYKSKSQGQELAGDVDNRIWSLAAAYSLGAHKFTLAH
QRSSGDTGYVYGVDGGGTIFLANSIQYSDFNFADERSWQARYDLNMKTYGVPGLSFMTRY
VKGDNISTDTGEGKEHEWDIETKYVLQSGPAKDLSFRVRQAFYRASSNVTGDVNDFRVIV
EYPLSIL
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtgatgaagtggagcatgatcgcactggctgtatcggccggtacctcgcagttc
gcaatggcgtcctcccaagaggaatctaaaggtttcattgaagaccaaagcctgaccgca
aaaactcgtcttgagtacatgaaccgcgaccaacgtaacggcggcggcaacattgctctg
ccaggtggtggcttcaaaaatggctaccgtgaagataccggtattagtgagctgctcatt
tacaaatccggcttcacacaaggcactatcggtgtcggtgttgacgcattcgcaggcggc
accgcacgtctggacggtggcgaaggccgtcagggcaacaacctgtttgcttccgacgac
gaaggcaagcctgaacacacacaatcgaaagccggcgctgctgttaaattccgtctttcc
gacaccgtcttgaaatacggcacccaacaaactgaaagcccggtcttctccaccgatgac
agccgtttgttgccagaatttgctaccggtactttgatcaccagcaaggaaatcaaaggc
ctggagctgagcgctggtcacttcaccgcgatgagcgggcagcagaacatgggccacgac
agcatcaatggcgcacattctaaaggcctgacttccgctgacatcgctggcgcaacctac
cagttcaccgacaatttcgtggctggcgttgcggcttccgatgtcgatgactacttcaag
aagcaatacgtcaacctgaactacaccctgccgatcgacgattcgcaagcgctgaacttc
gacttcaacggctataagagcaagagccaaggtcaagagctggcaggcgatgtcgacaac
cgcatctggtcccttgcagctgcgtacagcctcggcgctcacaagttcaccctggcgcat
cagcgctctagcggtgacactggttacgtttacggcgtagacggtggcggcacgattttc
ctggccaactccatccaatactccgactttaacttcgccgacgagcgttcgtggcaggct
cgttatgacctgaacatgaaaacctacggcgtaccaggtctgagcttcatgacccgttac
gttaagggtgacaacatctccaccgataccggtgaaggtaaagaacacgaatgggacatc
gaaaccaaatacgtactgcagagcggtccagccaaagacctctcgttccgtgtacgtcag
gcgttctatcgtgcgtcctctaacgtcactggcgacgttaacgacttccgcgtaatcgtc
gaatacccactgagcatcttgtaa
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