Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a4461
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Entry
PSEBR_a4461 CDS
T01472
Name
(GenBank) Conserved hypothetical protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pba03400
]
PSEBR_a4461
DNA repair and recombination proteins [BR:
pba03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
PSEBR_a4461
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
FtsK_SpoIIIE
ResIII
T2SSE
AAA_30
AAA_10
TrwB_AAD_bind
AAA_19
AAA_7
CbiA
SRP54
P-loop_TraG
AAA_6
AAA_18
Motif
Other DBs
NCBI-ProteinID:
AEA70872
UniProt:
F2K517
LinkDB
All DBs
Position
complement(5409185..5410672)
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AA seq
495 aa
AA seq
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MPDSSQLVIGADLSGQPIAQAMRLANRHGLVAGATGTGKTVTLQRLAEMFSDAGVAVFAA
DIKGDLCGLGAAGNPQGKIAERIAGMPWLNHKPQAYPVTLWDIHGQSGHPLRTTLSEMGP
LLIGSLLELTDSQQSALYAAFKVADREGLLLLDLKDLKALLNHLKDNPELLGDDAALMTT
GSSQALLRRLSTLEQQGADALFGEPALQLEDILQPASDGRGRIHLLDASRLVHEAPKVYA
TFLLWLLAELFEQLPERGDADKPLLALFFDEAHLLFAGTPKALQERLEQVVRLIRSKGVG
VYFVTQSPGDLPDDVLAQLGLRIQHGLRAFTAKEQKSLRAVADGFRPNPQFDALAVLTEL
GIGEALVGTLQEKGTPEVVQRVLVAPPQSRIGPLSEAERAGLIASSPLQGRYDKPIDRES
AYEVLMGRKGLEPQAEEAPGKPTAEEPSFTEKAGEFLGTAAGQALKSAMRQAANQLGRQL
VRGLMGSLLGGSKRR
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgcctgactcatcgcaactcgttatcggggccgaccttagcggccagcccatcgcccag
gccatgcgcctggcgaaccgtcatggtctggtggcgggcgccaccggtaccggcaagacc
gtcaccttgcagcgcctggccgaaatgttcagcgacgccggcgtggcggtgttcgcggcg
gacatcaagggtgacctgtgcggcctcggcgcggcgggcaacccccagggcaagatcgct
gagcgcatcgccggcatgccttggctcaatcacaagccccaggcttatccggtgaccttg
tgggatatccacggccagtccggtcatccgctgcgcaccaccttgagtgaaatgggcccg
ttgttgatcggcagtctgctggaactgacggacagccagcagtcggcgctctacgccgcg
ttcaaggtggccgaccgcgaagggctgttgctactggacctcaaggacctgaaggcgctg
ctcaaccatctcaaggacaaccccgagttgctgggggacgacgcggccctgatgaccacc
ggctccagccaggcgttgttgcgacgtttgtccaccctggaacagcagggcgcggacgcg
ttgttcggcgagccggcgttgcagctcgaagacatcctgcaaccggccagtgatggccgt
ggtcgcattcacttgctcgacgccagccgtctggtccatgaggcgccgaaggtctacgcg
acgttcctgttgtggctgctggccgagctgttcgagcagttacccgagcgcggcgatgcg
gacaaaccgctgttggcgctgttcttcgacgaggcgcatttgctttttgccggcactccc
aaggccttgcaggaacgcctggagcaagtggtgcggctgatccgttccaagggtgtgggg
gtgtatttcgtgacccagtcgccgggcgacttgccggacgacgtgctggcgcagttgggc
ttgcgcatccagcacgggttgcgggccttcactgccaaggagcagaaatccctgcgggcg
gtggccgacggcttccggcccaacccgcagttcgatgccctggcggtgctgaccgaactg
ggcatcggtgaagccctggtgggcaccttgcaggaaaaaggtacgccggaagtggtccag
cgggtgttggtggcgccaccgcaatcgcgcatcgggccgctgagcgaagccgagcgcgcc
gggttgatcgccagttcgccgttgcaagggcgctatgacaaacccatagatcgcgaatcg
gcctatgaagtgctgatgggccgcaaagggctggaaccgcaggccgaagaggcgccgggc
aagccgacggcggaagaaccgagcttcaccgaaaaggccggcgagtttctcggcaccgcg
gccggccaggcattgaaatcggccatgcgccaggcggccaatcagttgggccggcaattg
gtgcgtgggttgatggggtcgttgctcggtggcagcaagcgccggtag
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