Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a4542
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Entry
PSEBR_a4542 CDS
T01472
Name
(GenBank) Putative transcription factor, GntR family
KO
K24967
GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pba03000
]
PSEBR_a4542
Transcription factors [BR:
pba03000
]
Prokaryotic type
Helix-turn-helix
GntR family
PSEBR_a4542
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTRA
GntR
HTH_DeoR
HVO_A0261_N
DUF4423
HTH_Crp_2
TrmB
RP-C
HTH_11
DIP2311-like_C
LexA_DNA_bind
HTH_36
HTH_IclR
Fe_dep_repress
CggR_N
Rrf2
EutK_C
RepL
Motif
Other DBs
NCBI-ProteinID:
AEA70956
UniProt:
F2KKZ4
LinkDB
All DBs
Position
5524291..5525022
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AA seq
243 aa
AA seq
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MNDILALRPDDTQPTPLYLQLARNLEAAIHAGQWKAEQAMPSERSLSEQLGISRVTARKA
LEVLFEQGLIRRNQGSGTFITPRLEQPLSRLSGFSEMLRLKGFVPGSQWLEREITPPTHE
ELIRLGLSPTDKVARLKRLRKADNTVMAIEMSTLPASIIPKPQAVGDSLYEFLDGIGKPV
VRALQHIQAINASDEFAALVGIAPGTAMLLMTRVGYLEDNTPIEVTDTYCRNDYYDFVAE
LRR
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacatcctggccctgcgccccgacgacacccaacccaccccgctctacctgcaa
ctggcccgcaacctggaggccgctatccacgccggccagtggaaagccgagcaagcaatg
ccctccgaacgcagcttgagcgagcaactgggcatttcccgggtcaccgcccgcaaagcg
ctggaagtgctgttcgaacaaggcctgatccgccgcaaccaaggctcgggaacgttcatc
accccgcgcctcgaacaaccgctctcgcgcctcagcgggttcagcgaaatgctccggctc
aaaggcttcgtgcccggctcccagtggctggagcgggaaatcaccccgccaacccacgaa
gaactgattcgcctgggcctgtcacccactgacaaagtcgcccggctcaaacggctgcgc
aaggccgacaacacggtcatggccatcgagatgagcaccctgcccgcatcaatcattccc
aagccacaggcggtgggcgattcgctttatgaattcctcgatggcatcggcaaaccggtg
gtgcgcgccctgcaacacatccaggccatcaacgcctcggacgagttcgccgccctggtg
ggcattgcccccggcaccgcaatgctactgatgacccgggtcggctacctggaagacaac
acgcccatcgaagtcaccgacacctattgccgcaacgactactacgactttgtcgcagag
ctgcggcgctag
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