Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a4656
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Entry
PSEBR_a4656 CDS
T01472
Name
(GenBank) Putative transcription factor, GntR family
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
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Paralog
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_24
HTH_Crp_2
MarR_2
HTH_36
HTH_23
MarR
HTH_28
Fe_dep_repress
RepL
LexA_DNA_bind
HTH_Tnp_ISL3
DUF4380
Rrf2
Motif
Other DBs
NCBI-ProteinID:
AEA71073
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Position
complement(5659581..5660975)
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AA seq
464 aa
AA seq
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MDKWKSALDLARSGESKYKILVQAIADDIEQGTLANDQRLPPQRQVADAMGISVQTVTNA
YKELERQGLVRCEVGRGSFVSRRMSDRVATYILDSPERALVDFSITRILHTREHDQAWRD
TCAALSTEEDQPWIHAFRPIAGFESHREAAAQWIGRQGLKVDRNDVLITNGAAHGIFLAL
ASLAGPDDVVLCEGLTDHGVIGNSQVLGFTLKGLEMDRYGIDPEHFEDMCSNERITALVC
TPNLNNPTTSLMPDARRREIAEIARRFGVHIIEDDVYGPLLDERRAPPISYYLPELSFYC
TSMTKSVLTGLRTGYLVVPKRLALRTESILRVNSWMATPMVSEIATRWIRDGRAESLVQL
QRQLLAGRQAMVTEYMGEHLLGQHPHALSAWVGIPSHWEVDSLVRALRHKHIAVTSPDPF
TVRGTPRPRAVRVCVGAECSDEEMRHALIGMRQIFNQYPQIHDF
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggataagtggaagtcagccttggacctcgcccgcagcggtgaatccaaatacaagatt
ctggtgcaggccattgccgacgatatcgaacagggcaccctggccaatgaccagcgcctg
ccgccgcaacggcaggtagctgacgccatgggtatcagcgtgcagaccgtcaccaacgcc
tataaggagttggagcgccagggactggtgcgctgtgaggtcgggcgtggcagtttcgtc
tcgcggcgcatgagcgaccgggtggcgacgtacattctcgacagtcccgagcgagcgctg
gtggatttttccatcacccgcatcctccacacccgcgagcatgaccaggcctggcgtgat
acctgcgcggcgctgagcactgaagaggatcagccgtggattcatgcgtttcgccccatc
gccggttttgaatcccatcgcgaagcggcggcgcagtggatcggccggcaagggctgaaa
gtcgaccgtaacgatgtgctgatcaccaacggcgcggcccacgggattttcctggctctc
gcttcgctggcgggccctgatgacgtggtgctctgcgaaggcttgaccgaccacggcgtg
atcggcaattcccaggtgctgggcttcaccctcaagggcctggagatggaccgctatggc
atcgaccccgaacatttcgaagacatgtgcagcaacgagcgcatcacggcgctggtgtgc
acgccgaacctgaacaaccccaccaccagcctgatgcccgacgcccgccgccgggaaatc
gccgagattgcccggcgcttcggtgtgcacattattgaagacgatgtgtacggcccgctg
ctggacgagcgccgggcgccgcccatcagctattacctgccggagctgtcgttctactgc
acgagcatgaccaagtcggtgctcacgggcctgcgcaccggttatctggtggtgcccaag
cgcctggccctgcgcaccgagagcatcctgcgggtcaacagttggatggccacgcccatg
gtctcggagatcgccacccgctggattcgcgatggacgcgccgagtcgctggtgcaattg
caacgtcaactgctggccgggcgccaggcgatggtcaccgagtacatgggcgaacatctg
ctgggccagcacccgcatgccttgagtgcctgggtcggtatcccgtcccattgggaagtg
gacagcctggtgcgggcgctgcggcacaagcacatcgccgtgacctcgcccgatccgttc
accgtccgcggcacccccaggccccgcgcggtgcgggtctgcgtcggtgccgaatgcagt
gacgaagaaatgcgccatgcgctgatcggcatgcggcagatcttcaaccagtacccgcag
attcatgatttctga
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