Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a4751
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Entry
PSEBR_a4751 CDS
T01472
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pba03400
]
PSEBR_a4751
Enzymes [BR:
pba01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PSEBR_a4751
DNA repair and recombination proteins [BR:
pba03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PSEBR_a4751
Prokaryotic type
PSEBR_a4751
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AEA71170
UniProt:
F2KLC9
LinkDB
All DBs
Position
5757532..5758983
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AA seq
483 aa
AA seq
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MQLIWLRSDLRLHDNTALAAAAAQGPCVAVYLTSPEQWRAHDDAPCKIDFWLRNLGALSA
TLAELNIPLLIRAAAHWHQAPQVLLKLCRELNVGAVHVNEEYGLNETRRDAEVARVLNDQ
GVEFHSHLDQLLFKPGSVLTKTGNYFQVFSQFRKVCYSRLHFSLPSLVATPARQALTGIA
RDPVPTQVDGFAPPSEALRALWPAGETEARRRLDTFVDQHIDDYQGERDYPARPGTSQLS
AYLVAGVVSPRQCLHAALQANQGEFESGSAGAVTWINELLWREFYKHILVGYPRVSRHRA
FRPETEALAWRKAPAELEAWKQARTGLPIIDAAMRQLLETGWMHNRLRMVVAMFLTKNLL
IDWREGERFFMQHLIDGDLAANNGGWQWSASTGTDSAPWFRIFNPLSQSEKFDREGLFIK
RWLPELNDLDKQQVHSPNTQGGLFGAVDYPAPIVDLRQSRARALAAFRNLPARQDATVEG
MGD
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgatctggctgcgcagcgacttgcgcctgcacgacaacaccgccctcgcggct
gcggcagcccaaggcccctgcgtggcggtgtacttgaccagccccgaacaatggcgcgcc
catgacgacgcaccgtgcaagatcgatttctggctgcgcaacctcggcgcgttgagtgcg
accctggccgaattgaacatcccactgctgatccgcgccgctgcgcattggcaccaggcc
ccgcaggtactactcaagctgtgtcgcgaactgaacgtcggcgccgtgcatgtcaacgaa
gagtacggcctgaatgaaacgcgacgcgacgccgaagtcgcccgcgtgttgaatgaccag
ggcgttgaatttcacagccacctcgatcaattgctgttcaagcccggtagcgtactgacc
aagaccggcaattacttccaagtgttcagtcagttccgcaaggtctgctacagccgtctg
cacttttcattgccgagcctggtcgccacgccggcccggcaggccctcaccggcattgcc
cgcgacccggtgccgacgcaagtcgatgggttcgccccgcccagcgaagcgctacgcgcc
ctctggcccgccggggaaaccgaagcccgtcggcgcctggacacctttgtcgaccagcac
atcgacgattaccaaggcgaacgggattatcccgccagacccggcaccagccagctctcg
gcctatctggtggccggcgtggtgtcgccacgtcagtgcctgcacgccgcgctgcaagcc
aaccaaggtgaattcgagagcggaagtgccggtgctgtgacctggatcaatgaattgctc
tggcgcgagttttataaacacattctcgtgggctatccacgcgtgtcgcgccatcgtgcg
tttcgcccggaaaccgaggcgctggcatggcgcaaggcccccgcagaattggaagcctgg
aagcaagcacgcaccggcctgccgattatcgatgcagccatgcgtcaattgctggagacc
ggttggatgcacaaccgcttgcggatggtcgtagccatgttcctgaccaagaacctgttg
atcgattggcgcgaaggcgagcgctttttcatgcagcacctgatcgacggcgacctggcc
gccaacaatggcggctggcagtggagcgcctccaccggcaccgattccgcgccctggttc
cgtatcttcaacccgttgagccagtcggaaaaattcgaccgcgagggcctgttcatcaaa
cgctggctacctgaactgaacgatctggacaagcaacaggtccatagcccaaatacccag
ggcggcttgtttggcgccgtggattatccggcaccgattgtcgacttgaggcaatccagg
gcgcgtgcgctggcagcgttcagaaacctgccagcacgacaggacgcgaccgttgagggg
atgggcgattag
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