Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a4814
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Entry
PSEBR_a4814 CDS
T01472
Name
(GenBank) Putative polynucleotide adenylyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Pathway
pba03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PSEBR_a4814
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pba03019
]
PSEBR_a4814
Enzymes [BR:
pba01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
PSEBR_a4814
Messenger RNA biogenesis [BR:
pba03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PSEBR_a4814
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AEA71233
UniProt:
F2K5L9
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All DBs
Position
5836189..5837586
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AA seq
465 aa
AA seq
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MLKKLFQSFRSPLRRTQHIRSTPEVLNSGQHSLQKAQFSRYAVNIVERLQNAGYQAYLVG
GCVRDMLLNITPKDFDVATSATPEQIRAEFRNARIIGRRFKLVHIHFGREIIEVATFRAN
HPQNDEEEDSNQSSRNESGRILRDNVYGTLEEDAQRRDFTINALYYDPVSERILDYANGV
HDIRNRLIRLIGDPKQRYQEDPVRMLRAVRFAAKLDFGIEKHSAVPIRELAPMLREIPSA
RLFEEVLKLFLSGNAADTFEMLVDLQLFDPLFPASAEALEHNPTYTHTLISEALINTDLR
IKQNKPVTPAFLFAALLWPALPARVLRLQERGMPPIPAMQEAAHELIAEQCQRIAIPKRF
TMPIREIWDMQERLPRRSGKRADLLLDNPRFRAGYDFLLLRESAGEQTDGLGEWWTDYQD
ANDSERRDMIRELSGKDEGASGPRKRRRSSGAKRKRAGVPSASGE
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagaagctgttccagtcattccgttctcccttgcgtcgtacgcaacacattcgc
agcacgcctgaagtgctcaacagcggccagcattcactgcaaaaggcccagttcagccgt
tatgcggtgaacatcgtcgaacgtttgcagaacgccggttaccaggcttacctggtcggt
ggttgcgtgcgcgacatgctgctcaacatcacccccaaggatttcgacgtcgccaccagc
gccacgccggaacagatacgggccgaatttcgcaatgcgcggatcattggccggcgcttc
aagctggtccacattcacttcggccgcgaaatcatcgaagtggcgaccttccgcgccaat
catccgcaaaacgatgaagaggaagacagcaaccagtcttcccgcaacgagagcgggcgc
atcctgcgcgataacgtctacggcacgctggaggaagacgcgcaacgccgcgacttcacc
atcaacgccctgtattacgatccggtcagcgagcgcatcctcgattacgccaacggcgta
cacgacattcgcaatcgcctgatccgcctgattggcgaccccaagcagcgctaccaggaa
gacccggtgcgaatgctgcgggccgtgcgtttcgccgccaagctggatttcggcatcgaa
aaacacagcgccgtgccgattcgcgaactggcaccgatgctgcgggaaatcccttcggcg
cgcctgttcgaggaagtgctcaagctgttcctgtcgggcaacgccgcagacaccttcgag
atgctggtggacctgcagttgttcgatccgctgttccccgccagtgccgaggccctggag
cacaacccgacctacacccacaccttgatcagcgaagcactgatcaacaccgacctgcgc
atcaagcagaacaagccggtgacgcctgcgttcctgttcgccgcgctgctctggcctgcc
ctgccggcccgggtgttgcgcctgcaagagcgtggcatgccgccgatcccggcgatgcag
gaagctgcccacgagctgatcgccgaacagtgccagcgcatcgccattccaaaacgcttc
acgatgccgatccgcgagatctgggacatgcaggaacgcctgccacggcgcagcggcaaa
cgtgccgacctgctgctggacaacccgcgtttccgcgctggctacgacttcctgctgctg
cgtgaaagcgcgggcgagcagaccgatggcctgggcgaatggtggaccgattaccaggac
gccaacgacagcgagcgccgcgacatgattcgcgaactcagcggcaaggatgaaggcgcc
agcggcccgcgcaagcgccgtcgcagcagcggtgccaagcgcaagcgtgccggtgtaccg
agcgcatcgggcgagtaa
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