Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a4879
Help
Entry
PSEBR_a4879 CDS
T01472
Name
(GenBank) Glycine hydroxymethyltransferase (serine hydroxymethyltransferase)
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Pathway
pba00260
Glycine, serine and threonine metabolism
pba00460
Cyanoamino acid metabolism
pba00630
Glyoxylate and dicarboxylate metabolism
pba00670
One carbon pool by folate
pba00680
Methane metabolism
pba01100
Metabolic pathways
pba01110
Biosynthesis of secondary metabolites
pba01120
Microbial metabolism in diverse environments
pba01200
Carbon metabolism
pba01230
Biosynthesis of amino acids
pba01240
Biosynthesis of cofactors
pba04981
Folate transport and metabolism
Module
pba_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PSEBR_a4879
09102 Energy metabolism
00680 Methane metabolism
PSEBR_a4879
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PSEBR_a4879
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PSEBR_a4879
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PSEBR_a4879
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PSEBR_a4879
Enzymes [BR:
pba01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PSEBR_a4879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
AEA71301
UniProt:
F2KLI7
LinkDB
All DBs
Position
5913193..5914446
Genome browser
AA seq
417 aa
AA seq
DB search
MFSRDLTIAKYDADLFAAMEQEAQRQEEHIELIASENYTSPAVMEAQGSVLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKQLFGADYANVQPHAGSQANSAVYLALLSAGDTILGMS
LAHGGHLTHGASVSSSGKLYNAIQYGIDGNGLIDYDEVERLALEHKPKMIVAGFSAYSQV
LDFPRFREIADKVGAYLFVDMAHVAGLVAAGVYPNPVPFADVVTTTTHKTLRGPRGGLIL
ARANADIEKKLNSAVFPGAQGGPLEHVIAAKAICFKEALQPEFKTYQQQVVKNAKAMAGV
FIERGFDVVSGGTENHLFLLSLIKQEISGKDADAALGKAFITVNKNSVPNDPRSPFVTSG
LRFGTPAVTTRGFKEAECKELAGWICDILADLNNEAVIDAVREKVKAICKKLPVYGA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagccgtgatttgactattgccaagtacgacgccgatctctttgccgccatggag
caagaagctcagcgccaggaagagcacattgagctgatcgcttcggaaaactacaccagc
cccgcggtgatggaagctcaaggctcggtactgaccaacaagtacgccgaaggctacccg
ggcaagcgttactacggtggttgcgagtacgtcgacgtggtcgagcaactggccatcgat
cgcgccaagcaactgttcggtgccgactatgccaacgtccagccgcacgcaggctcccaa
gccaactccgccgtgtacctggcgctgctgtcggccggcgacaccatcctgggcatgagc
ctggcccacggcggtcacctgacccacggcgccagcgtttcctcctccggcaagctgtac
aacgccatccagtacggcatcgacggcaacggcctgatcgactacgacgaagtcgagcgc
ctggccctcgagcacaagccgaaaatgatcgtggccggtttctccgcctactcccaggtc
ctcgacttcccgcgtttccgcgagatcgccgacaaggtcggtgcctacctgttcgtcgac
atggcccacgttgccggcctggtcgccgctggcgtctacccgaacccggtgccattcgcc
gacgtggtcaccaccaccacccacaagaccctgcgtggtccacgtggcggcctgatcctg
gcgcgcgccaatgccgacatcgagaagaagctgaactccgccgtcttcccgggcgcccag
ggtggcccgctggagcacgtgatcgcagccaaggcgatctgcttcaaggaagccctgcaa
cctgagttcaagacttaccagcaacaagtagtgaagaatgccaaggccatggccggcgtg
ttcatcgagcgcggcttcgacgtggtgtccggcggtactgaaaaccacctgttcctgctg
tcgctgatcaagcaagagatctccggcaaagacgccgacgcggcgctgggcaaggcgttc
atcaccgtcaacaagaactcggtgccaaacgacccacgctctccgttcgtcacctcgggc
ctgcgtttcggcacccctgccgtgaccactcgtggtttcaaggaagccgagtgcaaggaa
ctggctggctggatctgcgacatcctggcggacctgaacaacgaagcggtcatcgacgcc
gtacgtgagaaggtcaaggctatctgcaagaagctgccagtctacggcgcttaa
DBGET
integrated database retrieval system
