Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a4888
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Entry
PSEBR_a4888 CDS
T01472
Name
(GenBank) DNA repair protein
KO
K04485
DNA repair protein RadA/Sms
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pba03400
]
PSEBR_a4888
DNA repair and recombination proteins [BR:
pba03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PSEBR_a4888
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
AAA_16
DnaB_C
AAA_22
GvpD_P-loop
AAA
RecA
SLFN-g3_helicase
AAA_14
AAA_24
nSTAND3
DUF7125
Rad51
NTPase_1
ABC_tran
MCM
AAA_5
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AEA71309
UniProt:
F2KLJ5
LinkDB
All DBs
Position
complement(5922328..5923695)
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AA seq
455 aa
AA seq
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MAKAKRMYGCTECGSTFPKWAGQCSECGAWNTLTETMVESGGAAAPTGRTGWAGQQAQIK
TLAEVSVEEIPRFSTASGELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCNLATRMP
ALYVTGEESQQQVAMRARRLGLPQDQLRVMTETCIETIIATARLEKPKVMVIDSIQTIFT
EQLQSAPGGVSQVRESAALLVRYAKQSGTAIFLVGHVTKEGALAGPRVLEHMVDTVLYFE
GESDGRLRLLRAVKNRFGAVNELGVFGMTDRGLKEVSNPSAIFLTRAQEEVPGSVVMATW
EGTRPMLVEVQALVDDSHLANPRRVTLGLDQNRLAMLLAVLHRHGGIPTHDQDVFLNVVG
GVKVLETASDLALMAAVMSSLRNRPLPHDLLVFGEVGLSGEVRPVPSGQERLKEAAKHGF
KRAIVPKGNAPKEAPPGLQIIAVTRLEQALDALFE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggcaaagcgcatgtacggctgcaccgagtgcggctcgacctttcccaaatgg
gccggccagtgcagcgaatgcggggcctggaacaccctgactgaaaccatggtggaaagc
ggcggcgcggcggcacccaccggtcgcacgggctgggccggtcagcaggcgcagatcaag
accctggccgaagtcagtgtcgaagaaatcccgcgtttctccaccgcatccggtgaactg
gaccgcgtgctgggcggcggcctggtggacggttcggtggtgctgatcggcggcgatccg
ggcatcggcaaatccaccatcttgttgcaaaccttgtgcaacctcgccacccgcatgccg
gcgctgtacgtcactggcgaagaatcccagcagcaggtcgccatgcgcgcccggcgcctg
ggcttgccccaggaccagttgcgggtcatgaccgaaacctgcatcgagaccatcatcgcc
acggcgcgcctggaaaaacccaaggtgatggtgatcgactcgatccagacgattttcacc
gaacaactgcaatcggccccgggcggcgtgtcccaggtgcgcgaaagcgcggcgttgctg
gtgcgctacgccaagcagagcggcacggcgattttcctggtgggccacgtcaccaaggaa
ggcgcactggcggggccgcgggtgttggagcacatggtcgataccgtgttgtatttcgaa
ggcgaatccgatgggcgcctgcgtttgctgcgggcggtgaagaaccgctttggcgctgtc
aacgaactgggtgtgttcggcatgaccgatagaggtctgaaagaagtctcaaacccttcg
gcgatctttctgacgcgtgcccaggaagaagtccccggtagcgtggtcatggcaacgtgg
gaaggcactcggccgatgctggtcgaagtgcaagcgctggtggacgacagccacctggcg
aacccgcgccgggtcaccctgggcctggatcagaatcggttggccatgttgctggcggtg
ttgcatcgacacggcgggattccgactcacgaccaggacgtgttcctcaacgtcgtgggt
ggggtcaaggtgctggaaaccgcgtccgacctggcgttgatggccgcggtcatgtccagc
ctgcgcaaccggccgctgccccacgacctgttggtgttcggcgaagtcgggctgtcgggt
gaagtgcggccggtacccagtggccaggagcggctcaaggaagcggccaagcacggcttc
aaacgcgccatcgtgcccaagggcaacgcgccgaaggaagccccgccggggttgcagatc
attgccgtgacacgcctggaacaggcgttggatgcgttgttcgaataa
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