Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a4953
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Entry
PSEBR_a4953 CDS
T01472
Name
(GenBank) putative DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Pathway
pba03030
DNA replication
pba03430
Mismatch repair
pba03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSEBR_a4953
03430 Mismatch repair
PSEBR_a4953
03440 Homologous recombination
PSEBR_a4953
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pba03032
]
PSEBR_a4953
03400 DNA repair and recombination proteins [BR:
pba03400
]
PSEBR_a4953
Enzymes [BR:
pba01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSEBR_a4953
DNA replication proteins [BR:
pba03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PSEBR_a4953
DNA repair and recombination proteins [BR:
pba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PSEBR_a4953
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
HP_1247_M
DNA_pol3_gamma3
CCCAP
Motif
Other DBs
NCBI-ProteinID:
AEA71375
UniProt:
F2K5T6
LinkDB
All DBs
Position
5993591..5994628
Genome browser
AA seq
345 aa
AA seq
DB search
MKLAPAQLGKHLQGALAPVYIISGDDPLLCQEAADAIRSAARQQGFDERQVFAADASFDW
GTLLQAGASMSLFAEKRLLELRLPSGKPGDKGAAALIEYCSRPAEDTVLLISLPKLDGSA
QKTKWGKALVEGPQTQFVQIWPVDVSQLPSWIRQRLSQAGLSASQDAVELIAARVEGNLL
AAAQEIEKLKLMAEGGQITVETVQAAVADSARFDVFGLTDAILNGEAAHALRMLEGLRGE
GVEPPVILWALARELRLLANLSLQYSQGVPLDKAFSQARPPVWDKRKPLMSKALQRYSAS
RWAQLLLEAQRIDAQIKGQAAGSPWMSLSRLSLLMAGQRLTLPAE
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgctcccgcccaactcggcaaacacctgcaaggcgccctcgcgccggtctac
atcatcagtggcgatgacccactgctgtgccaggaagccgccgacgccatccgctccgcc
gcccgccagcaaggcttcgacgagcgccaggtcttcgccgccgacgccagtttcgactgg
ggcacgctgctgcaggccggggcgagcatgtcgttgttcgccgaaaaacgcctgttggaa
ctgcgcttgccctccggcaaacccggggacaagggcgccgccgcgctgatcgaatattgc
tcacgcccggccgaagacacggtactgctcatcagtttgccgaaactcgacggcagcgcg
cagaagaccaaatggggcaaggccctggtcgaaggcccacagacccagttcgtgcagatc
tggccggtggacgtcagccagttgcccagctggatccgccagcgcctgtcccaagccggt
ctctcggccagccaggacgcagtggagctgattgccgcccgggtcgaaggcaacctgctg
gccgccgcccaggaaatcgaaaagctcaagctgatggccgaaggcggacagatcaccgtg
gaaacggtgcaggctgccgtggccgacagtgcgcgcttcgatgtcttcgggttgaccgat
gcgatcctcaacggtgaagccgcccatgccctgcgcatgctcgaaggcctgcggggcgaa
ggtgtcgaaccgccggtgatcctctgggccctggcccgggaattgcgcctgctggccaac
ctgtccctgcaatacagccagggcgtaccgctggacaaggccttcagccaggcccgcccg
cccgtctgggacaaacgcaaaccgctgatgagcaaggccctgcaacgctattccgcatcg
cgctgggcgcaattgctgctcgaggcccagcgcatcgatgcgcagatcaagggccaggcc
gccggctcgccgtggatgagcctcagtcgcttgtcgctgttgatggctggacagcggttg
acgttgcctgccgaataa
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