Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a5027
Help
Entry
PSEBR_a5027 CDS
T01472
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Pathway
pba03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PSEBR_a5027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pba03400
]
PSEBR_a5027
Enzymes [BR:
pba01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
PSEBR_a5027
DNA repair and recombination proteins [BR:
pba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
PSEBR_a5027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Phage_TAC_11
Vps53_N
Motif
Other DBs
NCBI-ProteinID:
AEA71458
UniProt:
F2KLR5
LinkDB
All DBs
Position
6080559..6080801
Genome browser
AA seq
80 aa
AA seq
DB search
MARKKAALDFEQSLADLQTLVERLENGELSLEDSLTAFEQGIGLTRDCQAALAQAEQKVQ
LLLERDGELTEEPFDAEQPE
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcaaaaaagctgcactggatttcgaacaatctctggccgacctgcaaacgctg
gtcgaacgcctggagaacggcgaattgtcgctggaagactcgctgaccgccttcgagcaa
ggtatcggcttgactcgcgactgccaggcggcgctggcccaggccgagcagaaggtgcaa
ttgctgctcgaacgtgacggtgagctgaccgaagagcctttcgacgcggaacagcctgaa
tga
DBGET
integrated database retrieval system
