Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a5128
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Entry
PSEBR_a5128 CDS
T01472
Name
(GenBank) putative ABC transporter, ATP-binding component
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Pathway
pba02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSEBR_a5128
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pba02000
]
PSEBR_a5128
Transporters [BR:
pba02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PSEBR_a5128
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
SMC_N
nSTAND_NTPase5
AAA_22
AAA_25
nSTAND3
AAA_28
FeoB_N
AAA_29
Rad17
Motif
Other DBs
NCBI-ProteinID:
AEA71579
UniProt:
F2KM36
LinkDB
All DBs
Position
complement(6198698..6199822)
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AA seq
374 aa
AA seq
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MSQVDSSAGASDVLVSFRGVQKSYDGENLIVKDLNLDIRKGEFLTLLGPSGSGKTTSLMM
LAGFETPTAGEILLAGRSINNVPPHKRDIGMVFQNYALFPHMTVAENLAFPLTVRGLNKS
DVSDRVKRVLSMVQLDSFAQRYPAQLSGGQQQRVALARALVFEPQLVLMDEPLGALDKQL
REHMQMEIKHLHQRLGVTVVYVTHDQGEALTMSDRVAVFHQGEIQQIAPPRTLYEEPKNT
FVANFIGENNRLNGRLHSQTGERCLVELGRGEKVEALAVNVGKPGEPVTLSIRPERVSLN
GASEQCVNRFSGRVAEFIYLGDHVRVRLEVCGKNDFFVKQPIAELDPGLAVGDVVPLGWQ
VEHVRALDPLLEAN
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgagccaggtcgattcaagcgcgggggccagtgatgtgctggtcagctttcgtggtgtg
caaaagagctacgacggcgagaacctgatcgtcaaagacctcaacctggatattcgcaaa
ggcgaattcctgaccctgctcgggccttccggctccggcaagaccaccagcctgatgatg
ctcgccgggtttgaaaccccaaccgccggcgagatcctgctggccgggcgctcgatcaac
aatgtgccaccgcacaagcgcgacatcggcatggtgttccagaactacgccttgtttcct
cacatgaccgtcgccgagaacctggcgttcccgctgaccgtgcgcggcctgaacaagagc
gacgtgagtgatcgggtcaagcgcgtcttgagcatggtccagctggacagcttcgcccaa
cgctacccggcgcaattgtccggcggccagcaacaacgggtggccttggcccgggcgctg
gtattcgagccgcagctggtgctgatggacgaacccctaggtgcgctggacaagcaattg
cgcgagcacatgcagatggaaatcaaacacctgcaccagcgcctgggcgtgaccgtggtc
tatgtgacccacgaccagggcgaagccctgaccatgtccgaccgtgtggcggtgttccac
cagggcgagatccagcagatcgccccgccgcgcaccctttatgaagagccgaaaaacacc
tttgtcgccaacttcatcggtgagaacaaccgccttaacggccgcctgcacagccaaacc
ggcgagcgctgcctggtggagctggggcgtggtgagaaggtcgaggcactggcggtgaat
gtcggcaagccaggcgagccggtgactctgtcgatccgcccggaacgggtgagcctcaac
ggcgcaagcgaacaatgtgtcaaccgcttctcagggagggtggcggaattcatctatctg
ggcgaccacgtccgggttcgcctggaagtctgcggcaagaacgacttctttgtgaaacaa
ccgattgccgagctcgatcccgggctcgccgtcggggacgtggttccgcttggctggcaa
gtcgagcatgtgcgtgcgctcgatccccttctagaggcgaattga
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