Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a5158
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Entry
PSEBR_a5158 CDS
T01472
Name
(GenBank) putative transcriptional regulator, LysR family
KO
K02623
LysR family transcriptional regulator, pca operon transcriptional activator
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pba03000
]
PSEBR_a5158
Transcription factors [BR:
pba03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PSEBR_a5158
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Mga
Motif
Other DBs
NCBI-ProteinID:
AEA71628
UniProt:
F2KM85
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Position
6249191..6250120
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AA seq
309 aa
AA seq
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MNIDTRIKFRHLVCFLEVARQGSLARAADKLAISQPALSKTLKELETLLAAVLFERSKKG
TTLTEAGAAFLRYAGPSVQALREGVNSLRAGVHEPVAISVGVLSTVESLLVPEVVCRLHA
RHPALVISVVTGPSAHLLSQLRVGELDLVVGRMTDSPLIHGLAFEHLYSESMTLVVCNNH
PVLANPQGHRNLEDYPWVLPLAGTTIRKFADALFVQHGITPSRQRLETLSVALSRRYVQC
SQAIWVAPFDAVRQDLKQGALVELELGAREPGGSVGLCTNPALPVTPQAQWCMEVLREVG
QEYLEGKYP
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
ttgaacatcgacacacgcatcaaattccgtcatctggtgtgttttctcgaagtggcgcgc
cagggaagcctggcccgtgcggcagacaaactggcaatcagccaaccggcactttccaag
acattgaaggagttggaaacgttgctggccgccgtgctgttcgaacgaagcaagaagggg
acgacgctgacggaagccggcgcagcttttctgcgatatgcggggccgagcgtgcaagcg
ctgcgcgagggggtcaacagcctgcgcgctggtgtccacgagcccgttgccatcagcgtt
ggcgtgctgtccacggttgaaagcctgttggtccctgaggttgtctgtcgactgcatgct
cgacatccggccctggttatcagcgtggtgaccggccccagtgcgcatttgctatcgcaa
ctgcgcgtcggtgaactggacctggtggttggcagaatgaccgatagcccattgattcat
gggctggcgttcgaacacctctacagcgagtccatgaccctggtggtgtgcaacaaccat
cctgtgctcgcgaatccacaggggcacaggaatctcgaagactatccctgggtgcttcca
ttggcggggacgaccatccgtaaattcgccgacgccctgtttgttcagcacggcattacc
ccatcacgccaacgccttgaaaccctatcggtcgcgttgagtcgacgctacgtacaatgc
agccaggccatctgggttgcgcctttcgacgcggtccggcaggacttgaaacaaggcgct
ttggtggagctggaattaggggcacgggaaccaggcggttccgtggggctgtgcaccaat
cccgcgttgccggtgacaccccaggcacagtggtgcatggaggttcttcgcgaagtcggg
caggaatacctcgaaggaaaatatccataa
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