Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a5192
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Entry
PSEBR_a5192 CDS
T01472
Name
(GenBank) putative DNA polymerase
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Pathway
pba03030
DNA replication
pba03430
Mismatch repair
pba03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSEBR_a5192
03430 Mismatch repair
PSEBR_a5192
03440 Homologous recombination
PSEBR_a5192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pba03032
]
PSEBR_a5192
03400 DNA repair and recombination proteins [BR:
pba03400
]
PSEBR_a5192
Enzymes [BR:
pba01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSEBR_a5192
DNA replication proteins [BR:
pba03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PSEBR_a5192
DNA repair and recombination proteins [BR:
pba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PSEBR_a5192
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DUF7833
RNase_H_2
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
AEA71666
UniProt:
F2KMC3
LinkDB
All DBs
Position
6290576..6291283
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AA seq
235 aa
AA seq
DB search
MSIFSWLRPAQPMLSEEMQRRLECLPTASALSECDLREQRWVVLDLETTGLNLNKDQVLS
IGAVVIEDGAIDFSQQFERTLQCDKQKLGPSVLIHGLAPSAIAAGSDPAEALLAFMEFVG
DSPLLAFHAPFDSHMLGRALKDYLGYRLQHSFLDVADLAPMLCPQANLRKSGLDEWIDWF
KLQVFDRHNASADALATAELALILFSRARQQQILSPLDLQQRLSHWKRRQQAPSL
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
gtgagcattttttcctggttgcgcccagcccagccaatgttgtccgaagaaatgcaaagg
cgcctggaatgcctgccgacggcttcagccttgagtgaatgcgacctgcgggaacaacgc
tgggtcgtgctggacctggaaaccaccgggttgaacctgaacaaggaccaggtgctgtcc
atcggcgcggtggtcatcgaagacggcgccatcgacttcagccagcagttcgaacgcacc
ctgcaatgcgataagcagaaactcgggccgagtgtgctgatccatggcctggcgcccagc
gccattgccgccggcagcgacccggccgaagcgctgctggcgttcatggagttcgttggc
gacagtccgctgctggcctttcatgcgccgttcgattcccacatgctcgggcgcgccttg
aaagactacctgggctatcgcctgcagcattcgttcctcgacgtggcggatctggcaccg
atgctttgcccccaagccaacctgcgcaagtcaggcctggatgagtggatcgactggttc
aagctgcaagtcttcgaccgccacaacgccagtgccgacgccctggccacggcggaactg
gcgctgatcctgttcagccgcgcccgccagcaacagatcctgagcccgcttgacctgcaa
caacgcctgagccactggaaacgacggcagcaggcgccttcgctctaa
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