Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a5222
Help
Entry
PSEBR_a5222 CDS
T01472
Name
(GenBank) putative oxidoreductase
KO
K03333
cholesterol oxidase [EC:
1.1.3.6
]
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Pathway
pba00984
Steroid degradation
pba01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00984 Steroid degradation
PSEBR_a5222
Enzymes [BR:
pba01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.3 With oxygen as acceptor
1.1.3.6 cholesterol oxidase
PSEBR_a5222
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GMC_oxred_C
GMC_oxred_N
DAO
Abhydrolase_6
Abhydrolase_1
Pyr_redox_2
FAD_binding_2
FAD_oxidored
NAD_binding_8
FAD_binding_3
HI0933_like
Thi4
GIDA
Pyr_redox
DUF4917
Fer4_9
Fer4_2
Hydrolase_4
Fer4_6
Lycopene_cycl
GDI
Motif
Other DBs
NCBI-ProteinID:
AEA71702
UniProt:
F2K5X5
LinkDB
All DBs
Position
complement(6326850..6330302)
Genome browser
AA seq
1150 aa
AA seq
DB search
MTRISTPISDIQEHYDVIVIGSGYGGGIAASRLSRAGRKVCLLERGREIQPGEYPNTLLA
ATEELQVHDPDGHIGSRTGLFDLHVNAQQNVVVGCGLGGTSLINANVSLEPEPGVFEDPR
WPQAVREHQDTLLKDGYARAREMLKPNSYPASEPNLPKLDAHKKSADYLKQGAHFYKPPI
NVTFDKLPNNLNHVGVEQLPCNGCGDCVSGCNNKAKNTTLMNYLPDAWNHGAEIFCQAEV
RHLERDGDGWIVHFQYLDSGREMFSAPTLFVRADIVVVSAGTLGSTEIMLRSRDKGLSMS
SQLGENMSGNGDILGFGHNCDQVINGIGFGAHSAKELEPVGPCITSVIDMRTEGDWRSRM
VIEEGSIPGALGRAMVPSMAAFAEMIGVPTDTGFGASLKYKGREAESFLRGPYYGALHNM
QTYLIMSHDNGKGRMLLDNKDQLRIDWPGVGEQENVTLGNERLHQSTKALGGIWVENPIW
TKLLKHSIVSVHPLGGCVMGEDATQGVVNHKGQVFSGASGTDVYPGLYVTDGSVIPTSLA
VNPLLTISAVSERNVGLLAADRGWIIDYTLPSAPRKAVAAPTLGVQFTETMKGYFSTAFT
QPQGTDLSLYEAAAKRGKTDNSPIEFTLTITAADLNRMIKEPEHAATLVGTLDAPSLSSQ
PLVASNGVFNLFEQYQEQVGVRHMNYDMKLTAEDGSDYYFSAFKTVPEDNGVLNIWHDTS
TLYVTLYRGPDKTGAVIGSGVMHILPADFAKQMTTMKVLNARNERERVEALARFGKFFAG
ILWESYGGVFAGDVYFNPDAPPRLKRPLDAPPPVVHFFQTEDNVELRLTRYQAGTKGPVM
LVHGLGVGSNIFSTDTIHTNLLEYLCKHEYDVWLLDLRVSILLPASKNEWNGDQVAQYDF
KAAIEQIQQATLASDVQCVVHCYGATTFFMSMLAGLQGVRSVVCSQIAADTVVATATGLK
AGLHLPGMLDAIGIKSLTAYADTKESWFNKLYDKALNGYARIEAQGYCTNPVCHRITFMY
ASLYRHDTLNETLHDNLHELFGESNIQTFEHLALIVRKGHLVDFKGNDVYMPHFDRLKLP
ICFISGADNQCYLPQSTLKTYERLCEMHGPQLFSRHEIPGYGHIDCMFGKDAVVDVYPII
LEHLEKTALG
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgacacggatctcgacccccatcagtgatatccaggagcactacgacgtgatcgtcatc
ggttccggctacgggggcggcattgctgcctcacgcctgtcccgggccgggcgcaaggtg
tgcctgctggagcgtggccgggaaatccagcccggcgaataccccaataccctgctcgcg
gccaccgaggaactgcaagtccatgacccggatggccacatcggttcgcgcaccgggctg
ttcgacctgcatgtcaacgcccagcagaacgtggtggtcggttgtggcctgggcggcacg
tcgctgatcaatgccaacgtttcgctggagccggagcctggcgtgttcgaggacccgcgc
tggccccaggcggtccgtgagcaccaggacacgctgctcaaggacggctacgcccgggcc
cgggagatgctcaagcccaattcgtatccggcctcggagccgaacctgcccaagcttgac
gcgcacaaaaaatcggccgattacctcaagcaaggcgcgcatttctacaagccgccgatc
aacgtgactttcgacaagctgcccaacaacctcaaccacgtcggtgtcgaacagctgccg
tgcaatggttgtggcgattgcgtttcgggctgtaacaacaaggccaagaacaccacgctg
atgaactacctgccggatgcctggaaccacggcgcggagattttctgccaggccgaggtg
cggcacctggagcgcgacggcgatggttggatcgtgcacttccaatacctggacagcggt
cgcgagatgttctcggcgccgaccctgttcgtgcgcgccgacatcgtggtggtgtctgcc
ggcaccctgggctccaccgaaatcatgttgcgctcgcgggacaagggcctgtcgatgtcc
agccaattgggcgagaacatgagcggcaacggcgacattctcggcttcggccacaactgc
gaccaggtcatcaatggcatcggcttcggtgcccattcggccaaggaactggaaccggtg
gggccatgcatcacctcggtcatcgacatgcgcaccgagggtgactggcgcagccgcatg
gtcatcgaggaaggttctattcccggcgccctcggccgggccatggtgccgagcatggcg
gcgtttgccgaaatgatcggcgtgcccaccgacaccggcttcggcgccagcctcaagtac
aaggggcgcgaagccgagagctttttgcgcggcccctactacggcgcgctgcataacatg
cagacctatctgatcatgagccatgacaacggcaagggccgcatgctgctcgacaacaag
gaccagttgcgcatcgactggcccggcgtcggcgaacaggaaaacgtcacccttggcaac
gagcggctgcaccagagcaccaaggccctgggtgggatctgggtcgagaacccgatctgg
accaagctgctcaagcacagcatcgtctcggtccatcccctgggcggttgcgtgatgggc
gaggatgcgactcaaggcgtggtcaaccacaagggccaggtgtttagtggcgccagtggc
accgatgtctacccgggcctgtacgtgaccgacggttcggtgatcccgacgtcgttggcg
gtcaacccgctgctgaccatctcggcggtgagcgagcgcaacgtgggcctgctggcggct
gatcggggttggatcatcgactacacgctgccttcggccccgcgtaaagcggtggcggcg
ccgacacttggcgtgcagttcactgaaaccatgaagggctatttttccaccgccttcact
cagccccagggcaccgatctcagcctgtacgaagcggcggccaagcgcggcaagaccgac
aactcgcccatcgaattcacgctgaccatcaccgccgccgacctcaaccggatgatcaag
gaaccggaacacgccgcgaccctggtgggcaccctcgacgcaccgtcgctctcgtcgcag
ccgctggtcgccagcaatggggtattcaacctgttcgagcagtaccaggaacaggttggc
gtgcggcacatgaactacgacatgaagctaaccgccgaagacggcagcgactattacttc
agcgccttcaagacggtgcccgaggataacggtgtgctgaacatctggcacgacaccagt
accttgtacgtcaccctctatcgtgggccggacaagaccggcgcggtgatcggttcgggg
gtgatgcacattctgccggccgacttcgccaagcaaatgaccaccatgaaagtgctcaat
gcccgcaatgaacgtgaacgcgtggaggcgctggcgcggttcggcaagttctttgccggc
atcttgtgggagagctatggcggtgtcttcgccggcgacgtctacttcaacccggacgcg
ccgccccggttgaaacggccgttggatgcgccgccaccggtggtgcatttcttccagacc
gaagacaacgtcgagctgcgcctgacccgttaccaggccggcaccaaaggtccggtgatg
ttggtccatggcctgggcgtgggctctaatattttctccaccgacaccatccacaccaac
ttgctggaatacctctgcaagcacgaatacgacgtctggctgttggatttgcgggtgagc
atcctgctgccggccagcaaaaatgaatggaacggcgaccaggtggcccagtacgatttc
aaggccgccatcgagcagatccagcaggcgaccctggccagtgacgtgcagtgcgtagtg
cattgctacggtgcgacgacgttcttcatgtcgatgctggcgggtttgcagggcgtgcgt
tcggtggtctgctcacagatcgccgccgacacggtggtcgccactgctactgggctgaag
gccggtttgcatttgccggggatgctcgatgccatcggcatcaagtccctcacggcctac
gccgacaccaaggaaagctggttcaacaaactctacgacaaggccctcaacggctatgcc
cggatcgaggcccagggctactgcaccaacccggtctgccatcgcatcacgttcatgtat
gcctcgctgtaccgccacgacaccctcaacgaaaccctgcacgacaacctgcatgaattg
ttcggcgagtcgaacatccagaccttcgagcacttggcgctgatcgtgcgcaaggggcac
ctggtggacttcaagggcaacgacgtctacatgccgcatttcgatcggttgaaattgccg
atctgcttcatcagcggtgccgacaaccagtgctacttgccgcaaagcaccctcaagacc
tacgagcgactgtgcgagatgcacggcccgcagttgttcagccgtcacgagataccgggt
tacggccacatcgactgcatgttcggcaaggatgcggtggtggatgtgtatccgatcatc
ctcgagcacctggagaagacggcgctcggttga
DBGET
integrated database retrieval system
