Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a5234
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Entry
PSEBR_a5234 CDS
T01472
Name
(GenBank) putative transcriptional regulator, AraC family
KO
K17736
AraC family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pba03000
]
PSEBR_a5234
Transcription factors [BR:
pba03000
]
Prokaryotic type
Helix-turn-helix
AraC family
PSEBR_a5234
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
DJ-1_PfpI
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
AEA71719
UniProt:
F2K5Z2
LinkDB
All DBs
Position
complement(6342377..6343336)
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AA seq
319 aa
AA seq
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MSQDFYFLLLPGFSAIGFISAIEPLRVANRFRGELYRWHVLSVDGGPVLASNGMSVNADA
ALEPLKKGATLWVVAGFEPLKFATPALERWLHRLDNEGVTLGGIDTGSVVLAEAGLLEGH
RVTLHWEAIEAFKESYPQLSVTQELFEIDRRRITCAGGTASIDLMLDLIGQAHGSELAIQ
VSEQFVLGRIRPRKDHQRMEIANRYGIRNKKLVHVIGEMETHSEPPLSTLALAESINVTR
RQLERLFRLHLNDTPSNFYLRLRLEKARQLLRQTDMSVLEVSIACGFESPSYFTRSYRAR
FERCPREDRRRQGDGRELV
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaggatttctactttttgttgctgccgggtttttcggccatcggtttcatttcg
gccatcgagcctttgcgggtcgccaatcggtttcgtggcgagctataccgctggcatgtg
ctgagtgtcgatggcgggccggtgctggcgagcaatggcatgtcggtcaacgccgatgcc
gcactggagcccttgaagaaaggcgcgaccctctgggtggtggccgggttcgagccgctg
aaattcgccaccccggcgctggagcgctggctgcatcggctggacaacgaaggcgtgacc
ttgggcggcatcgacaccggcagtgtggtgctggccgaggcggggctgttggaagggcac
cgcgtgaccttgcattgggaagcgatcgaggcgttcaaggagtcctatccgcaactcagc
gtgacccaggaactgttcgagatcgaccgtcgccggatcacttgcgcgggcggcactgct
tccatcgacctgatgctggacctgatcggccaggcccacggttcggaattggcgatccag
gtcagcgagcagttcgtgctcggccgcatccgcccgcgcaaagaccaccagcgcatggaa
atcgccaaccgctatggcattcgcaacaagaagctggtgcacgtcataggcgagatggaa
acccacagcgaaccgcccctgagcaccttggcgctggccgaatcgatcaacgtcacccgt
cgccagctcgaacgcctgttccgcctgcacctgaacgacaccccgagcaacttctacctg
cgcctgcgcctggagaaggcccggcagctgctgcgccagaccgacatgagtgtgttggaa
gtgagcatcgcctgcggctttgagtcgccgtcgtacttcacccgcagctatcgggcacgg
ttcgagcgctgcccgcgggaggatcgacgacggcagggggatgggcgggaactggtttga
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