Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a5235
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Entry
PSEBR_a5235 CDS
T01472
Name
(GenBank) putative choline ABC transporter, periplasmic component
KO
K02002
glycine betaine/proline transport system substrate-binding protein
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Pathway
pba02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PSEBR_a5235
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pba02000
]
PSEBR_a5235
Transporters [BR:
pba02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
PSEBR_a5235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
Motif
Other DBs
NCBI-ProteinID:
AEA71720
UniProt:
F2K5Z3
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All DBs
Position
6343523..6344467
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AA seq
314 aa
AA seq
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MKRLISSCVLALCGTTLLNGAAMAAEPAACQNVRLGVVNWTDVIATSALTQVMLDGLGYK
TKQTSASQQIIFAGIRDQRLDLFLGYWNPLMTQTITPFVEAKQVKVLEQPSLKDARATLA
VPTYLADKGLKTFADIAKFEKELGGKIYGIEPGSGANTQIKAMIAKNQFGLGKFQLVESS
EAGMLAAVDRAVRRKEAVVFFGWAPHPMNVNVQMTYLTGSDDALGPNEGMATVWTVTAPD
YAQQCPNVGRLLSNLTFSAEDESRMMQPLLDHKDPLESARQWLKDHPQDKQRWLEGVTTF
DGKPAADNLKLTSN
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgactgatcagctcctgtgtacttgcactttgcggtaccactttgctcaatggc
gccgccatggctgccgagcccgccgcgtgccagaacgtgcgcctgggcgtggtcaactgg
accgacgtcatcgccaccagcgccctgacccaagtgatgctcgacggcctcggctacaag
accaagcaaaccagcgcctcccagcaaatcatcttcgccggcatccgcgaccagcgcctg
gacctgttcctgggctactggaacccgttgatgacccagaccatcaccccgttcgtcgag
gccaagcaggtcaaggtgctggagcagccaagcctcaaggacgcccgcgcgaccctggcc
gtgccgacctacctggccgacaagggcctgaaaaccttcgccgacatcgccaaattcgaa
aaagagttgggcggcaagatctacggcatcgagcccggctccggcgccaatacccagatc
aaggcaatgatcgccaagaaccagttcggcctgggtaagttccagctggtggagtccagc
gaagccggcatgctcgccgccgtggaccgcgccgtgcgccgcaaggaagccgtggtgttc
ttcggctgggcaccgcacccgatgaacgtcaacgtgcaaatgacctacctcaccggcagc
gacgacgccctcggtccgaacgaaggcatggccaccgtgtggaccgtcaccgcgccggac
tacgcccaacaatgcccgaacgtcggtcgcttgctgagcaacctgacgttcagcgccgaa
gatgagagccggatgatgcagccgttgctcgatcacaaggacccgctcgaatcggcccgg
caatggctcaaggatcatccgcaagacaagcagcgttggctcgaaggcgtcaccaccttc
gacggcaagcccgccgccgacaacctgaaactgaccagtaactga
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