Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a533
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Entry
PSEBR_a533 CDS
T01472
Name
(GenBank) Oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Pathway
pba03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PSEBR_a533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pba03019
]
PSEBR_a533
03009 Ribosome biogenesis [BR:
pba03009
]
PSEBR_a533
Messenger RNA biogenesis [BR:
pba03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PSEBR_a533
Ribosome biogenesis [BR:
pba03009
]
Eukaryotic type
Pre-60S particles
RNases
PSEBR_a533
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AEA66681
UniProt:
F2KBH9
LinkDB
All DBs
Position
666487..667029
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AA seq
180 aa
AA seq
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MQNPQNLIWIDLEMTGLNPDTDVIIEMATIVTDSDLNTLAEGPVIAIHHSDEILAGMDEW
NTRQHGGSGLTQRVRESKISMAEAEAQTIAFLEQWVPKGKSPICGNSICQDRRFLYTHMK
SLESYFHYRNLDVSTLKELAARWAPQVRDSFQKGGSHLALDDIRESIAELQHYRKHFIKF
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacccgcagaacctgatctggatcgacctggaaatgaccggtctgaacccggac
accgacgtcatcatcgaaatggccaccatcgtcaccgacagcgacctcaacaccttggcc
gaaggcccggtcattgcgatccatcacagcgacgagatcctggccggcatggacgagtgg
aacactcgccagcacggcggctcgggcctgacccagcgggtgcgcgagagcaagatcagc
atggccgaggccgaagcccagaccatcgccttcctggagcagtgggtgcccaagggcaag
tcgccgatctgcggcaacagcatctgccaggatcgtcgcttcctgtacacccacatgaaa
tccctggaaagctacttccactaccgcaacctggacgtctccaccctcaaggaactggcc
gcccgctgggcaccgcaagtacgcgacagtttccagaagggcggcagccacctggccctg
gacgacatccgcgagtccattgccgagttgcagcattaccgtaagcacttcatcaagttc
tga
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