Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a5353
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Entry
PSEBR_a5353 CDS
T01472
Name
(GenBank) Conserved hypothetical protein
KO
K06969
23S rRNA (cytosine1962-C5)-methyltransferase [EC:
2.1.1.191
]
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pba03009
]
PSEBR_a5353
Enzymes [BR:
pba01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.191 23S rRNA (cytosine1962-C5)-methyltransferase
PSEBR_a5353
Ribosome biogenesis [BR:
pba03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PSEBR_a5353
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltrans_SAM
PUA_3
Cons_hypoth95
Methyltransf_31
Methyltransf_15
MTS
Methyltransf_25
TRM5-TYW2_MTfase
FtsJ
UPF0020
PrmA
Methyltr_RsmB-F
Methyltransf_24
Spermine_synth
TRM
Motif
Other DBs
NCBI-ProteinID:
AEA71856
UniProt:
F2K6C9
LinkDB
All DBs
Position
6473182..6474378
Genome browser
AA seq
398 aa
AA seq
DB search
MSLPSLRLKANADRRLRAGHLWVYSNEIDVAATPLHGFKAGDQAILEAAGGKPLGIVAMS
PNNLICARLLSRDVKLPLDKSLLVHRLNVALSLRERLFDKPFYRLVYGDSDLLPGLVVDR
FGDILVVQIASATMEAHKDDVIAALTQVLKPSGILFKNDSAARDAEGLTRYVETVFGLVP
EWVALEENGVKFEAPVMEGQKTGWFYDHRMNRARLAPYAKGKRVLDLFSYIGGWGVQAAA
FGASEVFCVDASAFALDGVERNAALNGFAEKLTCIEGDVFEALKELKASEERFDVIVADP
PAFIKRKKDLKNGEGAYRRLNEQAMRLLSKDGILVSASCSMHLPEDDLQNILLTSARHLD
RNIQLLERGGQGPDHPVHPAIAETRYIKSITCRLLPNS
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgcctagcctgcgcctcaaagccaacgccgaccgtcgcctgcgcgccggccac
ctgtgggtctacagtaacgaaatcgatgtagccgccaccccgctgcacggcttcaaggcc
ggcgaccaggccatcctcgaagccgccggcggcaagccgctgggcatcgttgcgatgagc
cccaacaacctgatctgcgcccggctgctgtcccgtgacgtgaagctgccgctggacaag
tccctgctggtgcatcgcctcaacgtggcgttatccctgcgcgagcgactgttcgacaag
ccgttctatcgcctggtctacggtgattccgacctgttgccaggcctggtggtcgaccgt
ttcggcgacatcctggtggtgcagatcgcctctgccaccatggaagcccacaaggacgac
gtgatcgccgccctgacccaggtgctcaagcccagcggcatcctgttcaagaacgactcc
gcggcccgtgacgccgaaggtctgacccgctacgtcgagaccgtgttcggcctggtgccg
gaatgggtcgccctggaagagaacggtgtgaagttcgaagcgccggtcatggaaggccag
aaaaccggctggttctacgaccaccgcatgaaccgcgcacgcctggccccgtacgccaag
ggcaagcgtgtactggacctgttcagctacatcggcggctggggcgtgcaagccgcagcg
ttcggcgccagcgaagtgttctgcgtcgatgcctcggcctttgccctcgacggtgtcgag
cgcaacgcggcgttgaacggcttcgccgagaagctgacctgcatcgaaggcgacgtgttc
gaagccctgaaagagctcaaggccagcgaagaacgtttcgacgtgatcgtggccgaccca
cccgctttcatcaagcgcaagaaagacctgaaaaacggtgaaggcgcctatcgccgcctc
aacgaacaagccatgcgcctgctcagcaaggacggcatcctggtcagcgcgtcgtgctcg
atgcacctgcccgaagacgacctgcaaaacatcctgctgaccagcgctcgccacctggac
cgcaacattcaactgctcgaacgcggcggccagggcccagaccatccggtacacccggcc
attgccgaaacccgctacatcaagagcatcacctgccggttgttgcccaacagctga
DBGET
integrated database retrieval system
