Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a5394
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Entry
PSEBR_a5394 CDS
T01472
Name
(GenBank) putative transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pba01011
]
PSEBR_a5394
Enzymes [BR:
pba01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
PSEBR_a5394
Peptidoglycan biosynthesis and degradation proteins [BR:
pba01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
PSEBR_a5394
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
Motif
Other DBs
NCBI-ProteinID:
AEA71901
UniProt:
F2K6H4
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All DBs
Position
complement(6513434..6514504)
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AA seq
356 aa
AA seq
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MLAMGTLLYGCQHLEPQLTIGDPFANEPYRSQLRWLEPAPTDTIIQISESSPQNGGGSLW
TRMRQGFSLQAKTQGVARIDEQRRWLMDRPAFLTQTGRAGSRYLHFIVGELNKRNMPLEL
ALLPAIESGFNPNAQSPAQALGLWQFIPATGRRYQLQQRGDYDERRDIPSSTRAALDYLS
YLHDYFDGDWLLALAAYNAGEGRVRDAITRNRARGLATNYWNLSLPGETQNYVPRLLALS
QLVNTPADYGVSLAPIADQPYFQMVALAQPVDLAHLAQLSGVHERELRMLNPAVRGRARG
RLLMPLDASHRLLAQPDMIAKAALPRVAGSEEQVVASPDTDTAEPQVAEVVVPPGV
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgctggccatggggaccttgctgtatggctgccagcacctcgaaccgcagttgaccatc
ggcgatccgttcgccaacgagccttaccgctcgcaactgcgctggcttgaaccggcgcct
acggacacgatcatccagatcagcgagtcatccccgcaaaacggtggcggcagcctgtgg
acgcgcatgcgccagggtttttccttgcaggccaagacccagggtgtggcgcgcatcgat
gagcagcgccgctggctgatggatcgcccggcttttctcacccagaccgggcgcgccggc
agccgttacttgcacttcatcgtgggtgaactgaacaagcgcaacatgccgctggaactg
gcgctgttgccagccatcgagagcgggttcaatccgaacgcccaatcgcctgcccaggcc
ctgggcctctggcaattcattcccgccacggggcgccgttatcaattgcagcagcggggg
gactatgacgagcgccgggacattccgtcatcgacgcgggccgccctggattatttgtcc
tacctgcacgattacttcgacggcgactggctgctggcgctggccgcctacaacgccggg
gaggggcgcgtacgcgacgcgatcacgcgcaatcgcgcccgcggcctggcgaccaactat
tggaacctgtcgttgcccggcgagacccagaactatgtgccgcggctgctggcgctgtcg
cagttggtgaatacgcccgccgactatggcgtgagcctggcgcccatcgccgaccagccg
tatttccagatggtcgccttggcgcagcccgtggacctggcgcacctggcacagttgtcc
ggtgttcatgagcgagagttgcgcatgctcaaccctgccgtgcgtggccgggccagggga
cgcttgctgatgcccctggatgcgtcgcacaggttgctggcccagccggacatgatcgcc
aaggccgcgctgccccgcgtggccggtagcgaagaacaagtggttgcctcacccgatacc
gatacggccgagccgcaagtggcggaggtggtagtgccgccaggggtgtaa
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