Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a5485
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Entry
PSEBR_a5485 CDS
T01472
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Pathway
pba00300
Lysine biosynthesis
pba00470
D-Amino acid metabolism
pba01100
Metabolic pathways
pba01110
Biosynthesis of secondary metabolites
pba01120
Microbial metabolism in diverse environments
pba01230
Biosynthesis of amino acids
Module
pba_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PSEBR_a5485
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PSEBR_a5485
Enzymes [BR:
pba01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
PSEBR_a5485
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
SPO11_like
Motif
Other DBs
NCBI-ProteinID:
AEA72008
UniProt:
F2K6T1
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All DBs
Position
6618304..6619134
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AA seq
276 aa
AA seq
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MLLRFTKMHGLGNDFMVLDLVSQHAHILPKHAKQWGDRHTGIGFDQLLIVEAPNNPDVDF
RYRIFNADGSEVEQCGNGARCFARFVLDKRLTAKRQIRVETKSGIIELDVRSDGQIGVNM
GAPRLVPADIPFQAPAQALSYQVDVDGATVELAAVSMGNPHAVLRVADINSAPVHELGPK
IEHHPRFPARVNVGFLQVIDRHRAQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPL
LIDLPGGRLSIEWAGPGQPVMMTGPAVRVYEGQVRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgcgttttaccaagatgcacggcctgggcaatgacttcatggtcctcgacctg
gtcagccagcacgcgcacatcctgcccaagcacgccaagcaatggggagaccggcacacc
ggtatcggtttcgaccagttgctgatcgtcgaggcacccaataacccggacgtggatttc
cgttatcggatcttcaacgccgacggttcggaagtggagcaatgcggcaatggcgcgcgc
tgcttcgcccgcttcgtgctggacaagcgcctgaccgccaagcggcagatccgcgtcgag
accaagagcggcatcatcgaactggatgtgcgcagcgacggccagatcggcgtcaacatg
ggcgctccgcgcctggtaccggcggacatccccttccaggcaccggcccaggccttgagc
tatcaggtggacgtcgatggcgccacggtggaactggcagcggtttccatgggcaacccc
cacgccgtgctgcgcgtggccgatatcaacagtgccccggtgcatgagctggggccgaaa
atcgagcatcatccgcgcttccccgcgcgagtgaacgtcggtttcctgcaagtcatcgac
cgccaccgcgcacaattgcgcgtctgggaacgcggtgccggggaaacccaggcctgcggt
accggcgcctgtgcggccgcagtcgctgcgatcagccaggggtggatggattcgccgttg
ttgatcgacctgcccggcgggcgtctgtccatcgaatgggcaggccctggccaaccggtg
atgatgaccggcccggcagtgcgcgtatacgaaggacaagttcgtctttga
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