Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a5540
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Entry
PSEBR_a5540 CDS
T01472
Name
(GenBank) putative oxidative stress LysR-family regulatory protein
KO
K04761
LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pba03000
]
PSEBR_a5540
Transcription factors [BR:
pba03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PSEBR_a5540
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HVO_A0261_N
MarR_2
Motif
Other DBs
NCBI-ProteinID:
AEA72069
LinkDB
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Position
6676741..6677661
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AA seq
306 aa
AA seq
DB search
MTLTELRYIVTLAQEQHFGHAAERCHVSQPTLSVGVKKLEDELGVLIFERSKSAVRLTPV
GEGIVAQAQKVLEQAQGIRELAQAGKNQLTAPLKVGAIYTVGPYLFPHLIPQLHRVAPQM
PLYIEENFTHVLRDKLRNGELDAIIIALPFNEADVLTLPLYDEPFYVLMPAQHPWTQKKT
IDAALLNDKSLLLLGEGHCFRDQVLEACPTLTKGSEGAKHTTVESSSLETIRHMVASGLG
ISILPLSAVDSHHYAPGVIEVRPLTPPVPFRTVAIAWRASFPRPKAIEILADSIRLCSVA
KPPAGK
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgaccctcacagaattacgctacatcgtgaccctcgcccaagagcaacatttcggccat
gcggccgagcgttgccacgtcagccagccgacgctgtcggtgggcgtgaaaaagcttgaa
gacgaactcggtgtgctgattttcgagcgcagcaaaagcgccgtgcgcctgacccccgtg
ggcgaaggcatcgtggcccaggcgcaaaaggtcctggagcaggcccagggcattcgcgaa
ctggcccaggccggcaagaaccagctgaccgccccgctgaaagtcggcgcgatctacacc
gtcggcccgtacctgttcccgcacctgattccacaactgcaccgggtcgccccgcagatg
ccgctgtacatcgaagaaaacttcacccatgtgctgcgcgacaagctgcgcaacggcgag
ctggacgcgatcatcatcgccctgccgttcaacgaagccgacgtcctgaccctgccgctc
tacgacgaaccgttctacgtcctgatgccggcccagcacccctggacccagaaaaaaacc
atcgacgccgccctgctcaacgacaagagcctgctgttgcttggcgaaggccactgcttc
cgcgaccaggtgctcgaagcctgcccgaccctgaccaagggcagcgaaggcgccaagcac
accactgtggagtccagctccctggaaaccatccgccacatggtcgcctcaggcctgggc
atttcgatcctgccgctgtcggcggtggacagccatcattacgcccccggcgtgatcgaa
gtccgcccactgacgccgcccgtgccgttccgcaccgttgccatcgcctggcgcgccagt
ttcccgcggcccaaggccatcgagatcctcgccgactcgatccgtctgtgctccgtggcc
aagccgcccgctggcaagtaa
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