KEGG   Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a5552
Entry
PSEBR_a5552       CDS       T01472                                 
Name
(GenBank) Conserved hypothetical protein
  KO
K11891  type VI secretion system protein ImpL
Organism
pba  Pseudomonas brassicacearum subsp. brassicacearum NFM421
Pathway
pba02025  Biofilm formation - Pseudomonas aeruginosa
pba03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pba00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PSEBR_a5552
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    PSEBR_a5552
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pba02044]
    PSEBR_a5552
Secretion system [BR:pba02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PSEBR_a5552
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical Bax1-I AAA_10 T7_gp14
Other DBs
NCBI-ProteinID: AEA72082
UniProt: F2K705
LinkDB
Position
complement(6692399..6695899)
AA seq 1166 aa
MKAFFSFMTRWVIPLLGLIALSLIIWFVGPLLDWLVPEGRRWALIILVFAVWIAYRVLRI
IQARRQAAEVMRSLAAQTPPDPTSIATAEELETLRQRMDEALALLKKAKLGGDERRNLYE
LPWYVIIGPPGSGKTTALVNSGLHFPLAAQLGAGAVRGVGGTRNCDWWFTDQAVLLDTAG
RYTTQDSDATIDKAAWLGFLGLLKKQRARRPIDGAFIAISLSDLLLGSDAERAAHAAAIR
LRIQELYTQLGVRFPIYLMLTKLDLVPGFMEYFDTLSKEERAQVWGMTFALDDGKSSDSP
LAHLQSEFTGLEQRLNDRLVERLQQERDPARRDLIYGFPQQFGALKDCLQSFLEGVFKPN
AFEERVLLRGVYFTSGTQEGSPIDRLIGSMAQSMNLDRQHLARQTGTGRSYFIEKLFTAV
AFAERGLVGVDPKVERRRKWIARGVLASTVVLVLVVSTLWWVSYRANQAYIAQVDQKVAP
LGQTVQNLSPAQRDVLAVLPLLNAVKHLADDAPSWAEGLGLYQGDMLEAESGSVYRKLLI
AVFAPRLLTRIEEQLHSGGNSDFLYEGLKAYLMLADTEHYDADFIKAWIALDWDRSLPRD
LPAEQRQALTAHLQALFERRPPLARLDPRLVEDLRRQLQQLPVAQRVYDRIKRQKLPEGI
PDFRINEAAGRDAALVFSRKSGKPLGEPLSGFFTVKGYRQGFLLTSLSQTGTLAEEQWVL
GHEEADQQNVASLAADVRRLYFQDYLRQWDALLADIDFVPITSVAQAADVLRVISGPTSP
LKKLLVAVAKETDLQQDERLLAAQGAPVEGGVDKLKERLGSLLGQEQATQNAPAQSDDPI
TAHFAELNSIVSKSEGEPAAIDGLLADMNALYVQVSAMVGASGDALLGEAKNQATAAATR
VSLNAERQPPLVQGLVKSVVNSTTNSMMGGVRNQLNAAWTSEVVNIYRQSLAGRYPMSPG
SARDATLDDFGQFFGVGGVMDNYFRKYLQPYVDTSTPTWRWQPGAAQKLGIAPGVLQTFQ
RAATIRDAFFRSGGTQPMVRFELKPVAMDSTITQFLLDLDGQQLSYDHGPSRPTAMQWPN
PGSIGVVRISIMPPSSSGRSGITLDGPWAWFRLLEQSDLTAGNSPDRFNLRLRVDGASAS
YELRANSAFNPFKSRVLSGFSLPERL
NT seq 3501 nt   +upstreamnt  +downstreamnt
gtgaaggcgtttttcagttttatgacccgctgggtcatcccattgctggggctgatcgcc
ctgagcctgatcatctggttcgttggcccgctgctcgattggctggtgcccgaaggccgc
cgctgggccttgatcatcctggtgttcgcggtatggatcgcctaccgggtgctgcgcatc
atccaggcgcgccgtcaggccgccgaagtgatgcgcagcctggccgcgcaaaccccaccg
gacccgaccagcatcgccaccgccgaagagctcgaaaccctgcgccagcgcatggacgaa
gccttggccctgctcaagaaagccaagctgggcggtgacgagcgccgcaacctctacgag
ctgccgtggtacgtgatcatcggcccgccgggttcgggcaagaccaccgcgctggtcaac
tccgggctgcatttcccactggccgcgcaactgggcgccggcgcggtacgcggtgtcggc
ggcacgcgcaattgcgattggtggttcaccgaccaggcggtcctgctcgacaccgccggc
cgctacaccacccaggacagcgacgcgaccatcgacaaggccgcctggctgggcttcctg
ggtctgttgaaaaaacaacgggcccggcgcccgattgatggcgcgttcatcgccatcagc
ctgtccgacctgctgctgggcagcgacgccgagcgcgccgcccatgccgccgcaatccgg
ctgcggatccaggagctgtacacccaactgggtgtgcgcttcccgatctacctgatgctg
accaagctcgacctcgtgccggggttcatggagtatttcgataccctgagcaaggaagag
cgcgcccaggtctggggcatgaccttcgccctggacgatggcaagagcagcgatagcccg
ctggcgcacctgcaaagcgaattcaccggccttgagcagcggctcaacgaccgcttggtg
gaacgcctgcaacaagagcgcgacccggcgcggcgcgatctgatctacggtttcccgcag
cagttcggcgccttgaaagattgcctgcaaagcttcctcgaaggcgtgttcaaacccaac
gccttcgaagagcgcgtgttgctgcgtggcgtgtatttcaccagtggcacccaggaaggc
agcccgatcgaccgcctgatcggctccatggcccagagcatgaacctggatcgtcagcac
ctggcgcgccagaccggcaccgggcgcagttatttcatcgaaaaactcttcaccgccgtg
gccttcgccgagcgcgggctggtgggcgtcgatccgaaagtcgagcggcggcgcaagtgg
atcgcccgcggcgtattggcctccaccgtggtgctggtgttggtggtcagcacgttgtgg
tgggtcagctatcgcgccaaccaggcctacattgcccaggtcgaccagaaggtcgcgccg
ttggggcaaaccgtgcagaacctcagcccggcgcaacgcgacgtcctcgccgtgttgccg
ttgctcaacgccgtgaaacacctggctgacgacgcaccgagctgggccgaaggcctgggc
ttgtaccagggcgacatgctcgaagccgagtccggcagcgtctaccgcaagctgctgatc
gcggtgttcgcgccacgtctgctgacgcggatcgaagagcagctgcacagcggcggcaat
tcggatttcctctacgaaggcttgaaggcctacctgatgctcgccgacaccgagcattac
gatgccgacttcatcaaggcctggatcgccctggattgggaccgcagcctgccgcgggat
ttgccggccgagcagcgccaggccctgaccgcgcatttgcaggcgctgttcgagcggcgt
ccgcccctcgcgcgcctcgatcctcgcctggtcgaagacctgcgccgccagttgcagcaa
ttgccggtggcccagcgggtctatgaccggatcaagcgccagaagctgcccgaaggcatc
ccggacttccgtatcaacgaagccgccgggcgtgacgcggcgctggtgttcagccgcaag
agcggcaagccattgggcgagccgctgagcgggttcttcaccgtcaagggttaccgccag
ggcttcttgctcaccagcctgagccagaccggcaccctggccgaagagcaatgggtgctt
ggccacgaagaggccgatcagcagaacgtcgccagcctggctgccgatgtgcgtcgcctg
tacttccaggactacctgcgccaatgggacgccttgctggccgacatcgactttgtgccg
atcaccagcgtggcccaggccgccgatgtgctgcgggtgatttccggcccgacctcaccg
ttgaaaaaactgctggtggcggtggcgaaggaaaccgacctgcaacaggatgaacgcctg
ctggctgcccaaggtgcgccggtagaaggcggtgtggacaagctcaaggaacgcctgggc
agcttgctcggccaggagcaggcgacgcaaaacgcaccggcgcaaagcgatgatccgatc
accgcgcacttcgccgagctcaacagcatcgtcagcaaaagcgaaggcgagccggcggcc
atcgacggtttgctggccgacatgaacgctttgtacgtgcaggtcagcgccatggtcggt
gccagcggcgacgccttgctcggcgaagccaagaaccaggccacggccgccgctacacgc
gtcagccttaatgccgaacgccagccgccgctggtgcagggcctggtcaagtcggtggtc
aactccaccaccaacagcatgatgggcggggtgcgcaaccaactgaacgccgcttggacc
agcgaagtggtgaacatctatcgccagtccctggccgggcgctatccgatgtcgccaggc
agtgcgcgggacgcgaccctggatgacttcggccagttcttcggcgtcggcggggtgatg
gacaactacttccgcaagtacctgcaaccctacgtcgacacctcgaccccgacctggcgc
tggcagccgggcgcggcgcagaagctcggcatcgcccctggcgtgctgcagaccttccag
cgcgcggcgaccatccgcgatgcgttcttccgttccggtggcacgcagccgatggtgcgt
ttcgaactcaagccggtggcgatggactcgaccatcacccagttcctgctcgacctcgac
ggccagcaactgagctacgaccacggcccaagccggccgaccgccatgcagtggccgaac
ccgggcagcatcggcgtggtgcggatctcgatcatgccgccgtcgtccagcggtcgctcc
ggcatcaccctggatgggccgtgggcctggttccggctgctggaacaatcggatctgacc
gccggcaactcgccggatcgcttcaacctgcggctgcgggtcgatggtgccagcgcctct
tatgagctgcgggccaacagcgccttcaacccattcaagagccgggtgctcagcggcttc
agcctgccggagcggctatga

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