KEGG   Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a5556
Entry
PSEBR_a5556       CDS       T01472                                 
Name
(GenBank) Conserved hypothetical protein
  KO
K11913  type VI secretion system protein
Organism
pba  Pseudomonas brassicacearum subsp. brassicacearum NFM421
Pathway
pba02025  Biofilm formation - Pseudomonas aeruginosa
pba03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pba00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PSEBR_a5556
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    PSEBR_a5556
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pba02044]
    PSEBR_a5556
Secretion system [BR:pba02044]
 Type VI secretion system
  Imp/Vas secretion system related proteins
   PSEBR_a5556
SSDB
Motif
Pfam: T6SS_FHA_C FHA Yop-YscD_cpl ExsD_M
Other DBs
NCBI-ProteinID: AEA72086
UniProt: F2K709
LinkDB
Position
complement(6699138..6700679)
AA seq 513 aa
MPLCLTITSYHKITPGQCSEKSMDQGVMAIGRNSDNDWVLPDPERLVSGKHCVIQYKDGR
YYLTDNSTNGVELVKAGVRLRKGNSEPLQDGEVIRIGDYEIQARVDFSLPVTDSNPFAES
PSSFEALMGRQGAAVHTPSPLHTPSPIQAAPPAHFQGGSAMDTLPDLFDFLTPASVPPAT
QPDHVPAEQHNFRPPTPIPRPSPPPVVEPVIPPSASVIPDDWDPFSDKPVPVAVAPQPVA
PQPVPLPPVVEPVASPVPQAPLVDIFAEISAPPPAPVPEASVTRVEPPVAPPVAPVAQVA
SVAPVAPVAPVTPIEANQPDLLQAFLRGAGLDQLRLDKANAEAQMESIGRSYRLMVEGLI
DVLRARSSLKGEFRIQQTMIQPVENNPLKFAPNVDEALLLLLRHGNQAFMAPDAAVRDSF
DDLRAHQLAVMAGVEAAIKHLLGRFEPAQLEERMAKPGGLSGIFSGSRQAQYWQQFTELY
SNISREAQEDFQDLFGREFSRAYEEHSTRQRRR
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgccgctgtgtttgactatcactagttatcacaagatcaccccaggccagtgttctgaa
aagtccatggatcagggggtgatggcaattggccgtaattccgataatgactgggtattg
ccggaccctgagcgcctggtttccggcaaacattgcgttatccaatacaaagacgggcgt
tattatttaactgataacagtactaatggtgtggaattggtcaaggccggtgttcgcctg
cgcaagggcaacagcgaacccctgcaagacggcgaagtgatccgcatcggtgattatgag
atccaggcgcgcgtcgatttcagcctgccggtcaccgacagcaacccgtttgccgaatcg
cccagcagtttcgaggccttgatggggcgccagggcgcagcggtgcatacgccgtcgccg
cttcatacgccatcgccgatccaagcggctccgcctgcgcatttccagggcgggtcggcc
atggataccctgccggacctgttcgatttcttgaccccagccagtgtcccgccggccacc
cagcctgaccatgtgccggccgagcagcacaacttccgcccgccgacgccaattccccgg
ccgagcccaccgcccgtggtggagccggtgataccgccgtctgcctcggtgattccggat
gactgggatcccttcagcgataagccggttccggtggcggtagccccgcagcccgtggcc
ccgcagccggtgccgctaccacctgtggttgagccggtcgcgtcgcctgtcccgcaggcc
ccgctcgtcgacatttttgctgaaatcagcgcaccgccgccggcacccgtgcccgaagcg
tcggtcacccgcgtcgagcccccggtcgcacctccagttgctccagttgctcaagttgct
tcggtcgctccagttgctccggtcgctccagttaccccgatcgaggccaaccaacccgat
ttgctgcaagccttcctgcgcggtgccgggctcgatcagttgcgcctggacaaggccaac
gccgaagcacagatggaaagcatcgggcgcagttaccggttgatggtcgaaggcctgatc
gatgtcttgcgcgcccgcagcagcctcaagggtgagttccgcatccagcagacgatgatc
cagccggtggaaaacaacccgctgaaattcgcccccaatgtggatgaagccttgctgttg
ctgttgcgccacggcaaccaggcgttcatggccccggacgcggcggtgcgtgacagtttc
gatgacttgcgggcccaccaactggcggtgatggccggcgtggaagcggccatcaagcat
ttgctggggcgtttcgagccggcgcaactggaagagcgcatggccaagcccggtgggctc
tcgggtattttcagcggctcgcgacaggcccagtactggcagcagtttaccgagctctac
agcaacatttcccgggaagcccaggaggatttccaggacctgttcggtcgcgagttcagc
cgcgcctacgaagaacacagtacgcgacagcgacgccgctaa

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