Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a5558
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Entry
PSEBR_a5558 CDS
T01472
Name
(GenBank) Conserved hypothetical protein
KO
K11901
type VI secretion system protein ImpB
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Pathway
pba02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PSEBR_a5558
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pba02044
]
PSEBR_a5558
Secretion system [BR:
pba02044
]
Type VI secretion system
Imp/Vas secretion system core components
PSEBR_a5558
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VipA
HTH_NPRL3
Motif
Other DBs
NCBI-ProteinID:
AEA72088
UniProt:
F2K711
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All DBs
Position
6702213..6702719
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AA seq
168 aa
AA seq
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MAKQSSQKFIARNRAPRVQIEYDVELYGAEKKVQLPFVMGVMADLAGKPAEPLAAVADRK
FLEIDVDNFDSRLKAMQPRVAFHVPNELTGEGNLSLDLTFESMDDFSPAAVARKVDSLNK
LLEARTQLANLLTYMDGKTGAEEIIMKAIKDPALLQALASAPKPAQDQ
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaagcaaagttctcagaaattcatcgcgcgcaaccgcgcgcctcgagtgcagatc
gagtacgacgtcgagctctacggcgccgagaagaaggtccagttgcccttcgtcatgggc
gtgatggccgacctcgccggcaagcccgccgagcctctggcagcggtggctgatcgcaag
ttcctcgagatcgacgtcgataacttcgactcgcgcctcaaggccatgcagccgcgcgtg
gcgttccatgtgcctaacgaactgaccggcgaaggcaacctgagcctggacctgacgttc
gaaagcatggacgacttcagcccggcggccgtggcccgcaaggtcgactcgctgaacaag
ctgctcgaagcgcgcacccagttggccaacctgctgacctacatggacggcaagaccggc
gccgaagaaatcatcatgaaggcgatcaaggacccagcgctgttgcaggccctggcgagc
gcgccgaagccagcacaggaccaatga
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