KEGG   Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a5566
Entry
PSEBR_a5566       CDS       T01472                                 
Name
(GenBank) putative chaperone
  KO
K11907  type VI secretion system protein VasG
Organism
pba  Pseudomonas brassicacearum subsp. brassicacearum NFM421
Pathway
pba02025  Biofilm formation - Pseudomonas aeruginosa
pba03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pba00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PSEBR_a5566
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    PSEBR_a5566
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pba02044]
    PSEBR_a5566
Secretion system [BR:pba02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PSEBR_a5566
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_5 AAA_16 AAA_22 Clp_N NBD_SMAX1 Zeta_toxin Sigma54_activat AAA_25 TniB nSTAND3 AAA_7 ATPase_2 AAA_14 NACHT AAA_18 Torsin Hpr_kinase_C HH_AprE CbiA SRP54
Other DBs
NCBI-ProteinID: AEA72096
UniProt: F2K719
LinkDB
Position
6709281..6711971
AA seq 896 aa
MGEISRAALFGKLNSVAYKAIEAATVFCKLRGNPYVELAHWFHQLLQLQDSDLHRIIRQF
NIEPARLARDLTEALDRLPRGSTSITDLSSHVEEAVERGWVYGSLMFGESQVRTGYLVLG
ILKTPSLRHALLGLSSEFDKVKVEALSERFDEYVGDSPENALTASDGFNAGAVPGEASGA
MAPSAMGKQEALKRFTVDLTEQARSGKLDPIVGRDEEIRQLVDILMRRRQNNPILTGEAG
VGKTAVVEGFALRIVAGDVPPALKDVELRSLDVGLLQAGASMKGEFEQRLRQVIEDVQAS
PKPIILFIDEAHTLVGAGGAAGTGDAANLLKPALARGTLRTVAATTWAEYKKHIEKDPAL
TRRFQVVQVAEPSEDKALLMMRGVASTMEKHHQVQILDEALEASVKLSHRYIPARQLPDK
SVSLLDTACARVAISLHAVPAEVDDSRRRIEALETELQIIAREHAIGVVIGNRQTQSETL
LSAERERLAELEGRWAEEKTLVDELLATRATLRERVGVVDSEDNSEASDNESHQLREKLV
DLQQRLTALQGETPLILPTVDYQAVASVVADWTGIPVGRMARNELETVLNLDQHLKKRII
GQDHALQMIAKRIQTSRAGLDNPSKPIGVFMLAGTSGVGKTETALALAEAMYGGEQNVIT
INMSEFQEAHTVSTLKGAPPGYIGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVHEIFF
QVFDKGVMEDGEGRVIDFKNTLILLTTNAGTELIAQVCKDPQNVPEPEEIAKALRQPLLE
IFPPALLGRLVTIPYYPLSDEMLKAITRLQLNRIKKRVESTHKVAFDYDDAVIDLIVSRC
TETESGGRMIDTILTNSLLPDMSREFLTRMLEGKALAGVRISAVDNELQYDFSDAA
NT seq 2691 nt   +upstreamnt  +downstreamnt
atgggtgaaatcagtcgcgccgcgttgttcggcaaactcaacagcgtggcctacaaagcc
atcgaagccgccaccgtgttctgcaagttgcgcggtaacccttatgtggaactggcccac
tggtttcaccagttgctgcaactgcaggactcggacctgcaccgcatcatccgccagttc
aacatcgaaccggcgcgcctggcccgtgacctgaccgaagccctggatcgcctgccacgg
ggttcgacgtccatcaccgacctgtcgtcccacgtcgaagaagccgtggagcgcggctgg
gtctacggcagcctgatgttcggcgaaagccaggttcgcaccggttacctggtgctgggc
attctcaagaccccgagcctgcgccacgcactgctgggcttgtcgtcggagttcgataag
gtcaaggtcgaagccctgagcgaacggtttgacgaatacgtcggcgactcgccggaaaac
gccctgaccgccagcgacggcttcaatgccggcgcggtgccgggcgaagccagcggcgcc
atggcccctagcgccatgggcaagcaggaagccctcaagcgctttaccgtcgacctcacc
gagcaggcccgcagcggcaagctcgacccgatcgtcggccgtgacgaagagatccgccaa
ctggtggacatcctcatgcgccgccggcagaacaacccgatccttaccggtgaagccggc
gtgggcaagaccgccgtggtcgaaggcttcgccctgcgcatcgtcgccggcgacgtgccg
ccggccctcaaggacgtggaactgcgcagcctcgacgtgggcctgttgcaggccggcgcc
agcatgaaaggcgagttcgaacagcgcctgcgccaggtcatcgaagacgtccaggcctcg
cccaagccgatcatcctgttcatcgacgaagcccacaccctggtcggtgccggtggcgcc
gccggcacgggcgacgcggccaacctgctcaagccggcgttggcccgtggcaccttgcgc
accgtggccgccacgacctgggccgagtacaagaagcacatcgaaaaagacccggccctg
acccgccgcttccaagtggtgcaagtggccgagccgtcggaagacaaggccctgctgatg
atgcgcggcgtggcctcgaccatggaaaaacaccaccaggtgcagatcctcgacgaagcc
ctggaagcttcggtcaagctgtcccaccgctacattcccgcgcgccagctgccggacaaa
tccgtgagcctgctggacaccgcctgcgcccgcgtcgccatcagcctgcacgccgtaccg
gccgaagtggacgacagccgtcggcgcatcgaagcgctggaaaccgagttgcaaatcatc
gcccgtgaacacgcgattggcgtggtcatcggcaaccgccagacccagagcgaaaccctg
ctgagcgccgagcgcgaacgcctggccgagctggaaggccgctgggccgaagagaaaacc
ctggtggacgaactgctcgccacccgcgccaccttgcgcgaacgcgttggcgtggtggac
agcgaagacaacagcgaagcttctgacaacgaaagccaccaactgcgcgagaagctggtg
gacctgcaacagcgcctgaccgccctgcaaggcgaaaccccgctgatcctgccgaccgtg
gattaccaggccgtggcctcggtggtcgccgactggaccggtatcccggtgggccgcatg
gcccgcaacgaactggaaaccgtgctcaacctcgaccagcacctgaagaaacgcatcatc
ggccaggaccatgccttgcagatgattgccaagcgcatccagacctcccgcgccggcctc
gacaacccgagcaagccgattggtgtgttcatgctcgccggcacctccggcgtgggcaag
accgaaaccgccctggccctggccgaagccatgtacggcggcgagcagaacgtcatcacc
atcaacatgagcgagttccaggaagcccacaccgtatcgaccctcaagggtgcgccaccg
ggctacatcggctatggcgaaggcggcgtgctgaccgaagccgtgcggcgcaaaccgtac
agtgtggtgttgctggacgaggtcgagaaggcccacccggacgtgcatgagatcttcttc
caggtgttcgacaaaggcgtgatggaggacggtgaaggccgggtgatcgacttcaagaac
accttgatcctgctgaccaccaacgccggcaccgagttgattgcccaggtctgcaaagac
ccgcagaacgtgcccgagccggaagaaatcgccaaggccctgcgccaaccgctgctggag
attttcccgccagccttgctgggccgcctggtgacgatcccgtactacccgctcagcgac
gagatgctcaaggccatcacccgcctgcaactcaaccgcatcaagaagcgcgtggaaagc
acccacaaagtcgccttcgactacgacgacgcggtgatcgacctgatcgtctcgcgttgc
accgaaaccgaaagcggcgggcgcatgatcgacaccatcctgaccaacagcctgctgccg
gacatgagccgcgagttcctgacccgcatgctcgaaggcaaggctttggccggggtgcgg
atcagcgccgtggacaatgaattgcagtacgatttcagcgacgcggcctga

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