Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a5596
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Entry
PSEBR_a5596 CDS
T01472
Name
(GenBank) putative diguanylate cyclase/phosphodiesterase
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_3
PAS_9
PAS_4
PAS
PAS_8
PAS_PdeA
DUF7525
Motif
Other DBs
NCBI-ProteinID:
AEA72132
UniProt:
F2K755
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Position
complement(6758834..6761674)
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AA seq
946 aa
AA seq
DB search
MEPRVICKQYAMEMAVERTRLLYQGSLLPTLFMLLNGLVCAALLWEPRRYFLVSVWLVWL
LSLVALRVIQVAAFDSAMPSRQAHPIWLRMFLLGSAMTGLTLAGAGIALVPADSFQQQAW
VFGLIGAAALSASVAYAVSLPAFLSFTLPCLLPAIGYLFWGGDEQQRGWGWLGLIVLVSL
SVVAWQVNRLIQSGLLRRFQNQALIEHLQQAQTRGAQLNDALAREVEQRRSAEEKLRAAQ
VGLEARVAQRSLELEVASQALSKSEARLALALKASELGLWDWNLQTDEVHHTQLKELFGL
EPEYITAMLTHLTPRLHPQDLPALKRALVEHLKGRSEDYQIEYRVRHGDGHWVWIEDRGR
AVERSVSGRVLRMVGTRRDISASKELEQQRQLAATVFEAASEGIVIFDPHYVLLAANQAF
TRVTGFNIDEMLGRNVVDLPCSRDARRHYPIIRQALKQHGTWQGELVEARANGELYPQWL
QLNVVRNARGNVSHIVGFFADLSARRESEERMRYLTHYDELTGLANRSLFRERLHEAHQR
VRQGGRRSLALLHINLDRFKLLNDSLGHDIADQLLQKMARRLINALPEADTIARLSGDEF
AVLFDAYGNLSSLARVATRLAAKLRVPLTIEGHELVLSASIGISLLPDNTREVAMLVSQA
NMAMQHAKHLGGNNFQFYTDSLQASTLERLQLENQLRKALEEQQLKVFYQPKLCLATGRL
NAAEALVRWDHPAMGRVPPGDFIGLAEETGLIGPIGEFVLRQACWQACEWQRQGLAPIRV
SVNLSVHQLRQGKLVSLVRQVLEETGLDPQYLELELTESQLLDSVEHIIATFQQLRDLGV
KLAIDDFGTGYSSLSYLKRIPVDYVKIDQAFIRGLGEGSVDAAITRAIIAMAHGLSLKVV
AEGVERQEQLEFLRNERCDEVQGYLISRPVEAEGLAGLLRAQHLVE
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
gtggagccgcgggtcatctgcaagcagtacgccatggagatggcggtcgagcgcacacgt
ctgctgtatcaaggctcgctgctgcctacgttgttcatgttgctcaatggtctggtctgc
gccgccctgttatgggagccgcggcgctatttcctggtcagcgtctggctcgtctggttg
ttgtcgctggtagccttgcgggtgatccaggtggcggccttcgattcggcgatgccgagc
cgccaggcacacccgatctggttgcgtatgtttttgctcggctcggcgatgaccggcctg
acgctggctggggccggtatcgcgctggtcccggctgacagtttccagcaacaggcctgg
gtattcggcctgattggcgcggcggccctgtcggccagcgtggcctacgcggtgagcctt
cccgcattcctgtcctttaccttgccgtgcctgttaccggccatcggctacctcttctgg
ggcggcgacgagcagcaacgcgggtggggctggcttgggctgatcgtgctggtctcgctg
agcgtggtcgcctggcaagtcaaccgcttgatccaaagcggcctgttgcgacgcttccag
aaccaggcactgatcgagcatctgcagcaagcacaaacccgcggcgcccagctcaacgac
gcgctggcccgggaggtcgaacaacgccgttctgcggaggaaaaactacgggcggcccag
gttggcctggaagcgcgggtagcgcagcgcagtcttgaactggaggtcgccagccaggcg
ttgagcaagagtgaggcgcgtctggccctggcgctcaaagccagcgagctggggttgtgg
gactggaatctacagactgacgaagtccatcacactcagctcaaggaactcttcggcctg
gaacccgaatacatcacggcgatgctcactcatctcaccccgcgtctgcatccgcaggac
ctgccggcgctcaagcgggccttggtcgaacacctcaagggccgcagcgaggattaccag
atcgaataccgtgtgcgccacggcgatggccactgggtctggatcgaagaccgcggccgg
gccgtggagcgcagcgtgagcggacgggtgctgcgtatggtcggcacccggcgagacatc
agcgccagcaaggaactcgagcagcaacggcaactggcggccacggtgttcgaagccgcc
agcgaaggtatcgtgattttcgacccccactacgtgctactcgctgccaatcaggcgttc
acgcgggtcaccggtttcaatatcgatgagatgctcgggcgcaatgtggtggacctaccg
tgcagtcgcgatgcacgccggcattaccccatcattcgccaagcgctcaagcaacacggc
acctggcagggtgagttggtggaggcgcgggccaacggcgagttgtatccgcaatggctg
caactgaacgtcgtgcgcaatgctcggggaaatgtcagccatatcgtgggcttcttcgcc
gatctttcggcgcgacgcgaatccgaagagcggatgcgctacctgacccattacgacgaa
ttgaccgggctggccaatcgctcgctgtttcgcgaacgcctgcacgaagctcatcagcgt
gtgcgccaaggcggacggcgcagcctggcgttgctgcatatcaacctggaccgtttcaag
ttgctcaacgacagcctcggccatgacatcgccgaccagttgttgcagaaaatggcacga
cgcctgatcaatgcgctgcccgaggcggataccatcgcccggctatcgggcgatgagttt
gcggtgttgttcgatgcctatggcaacctttcgagcctggcgcgggtggcgactcggctg
gccgccaagctgcgtgtgccactgaccatagaaggccatgaactggtgctcagtgcctcg
atcggcatcagcctgttgcccgacaacacgcgggaagttgccatgctggtcagccaggcg
aacatggctatgcaacatgccaagcatttggggggcaacaatttccagttctacaccgac
agcctccaggccagcacgctggagcgcctgcaactggagaatcagttgcgcaaggccttg
gaagagcaacaactgaaggttttttatcagccaaaactgtgcctggcgaccggtcgcctg
aacgccgccgaggcgttggtgcgttgggatcatccggccatgggccgtgttccacctggg
gatttcattggcctggccgaagagaccgggttgattgggccgattggtgaattcgtattg
cgccaggcttgttggcaggcatgcgaatggcagcgccaggggctggcgccgatcagggta
tccgtcaatttgtcggtgcatcagttgcgccagggcaagctggtcagcctggtgcggcag
gtactggaagaaaccggtctggaccctcaatacctggaactggagctgaccgagagccag
ttgctcgacagcgtcgaacacatcatcgccacgttccagcaattgcgtgaccttggggtc
aagttggcgatcgacgatttcggcaccggttactcatccttgagttacctcaagcgcatc
ccggtggattacgtgaagatcgaccaggcgttcattcgcgggttgggtgagggcagcgtg
gatgcggcaattacccgggcaatcattgcaatggcccatgggttgtcgctcaaggtcgtg
gccgaaggcgttgagcggcaggagcagctcgaattcctcaggaatgaacgttgcgatgag
gttcaagggtatctgatcagccggccggtggaggctgaggggctggcggggttgttgcgg
gcgcaacacctggttgaatga
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