Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a5629
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Entry
PSEBR_a5629 CDS
T01472
Name
(GenBank) putative GDP-mannose 4,6-dehydratase
KO
K01711
GDPmannose 4,6-dehydratase [EC:
4.2.1.47
]
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Pathway
pba00051
Fructose and mannose metabolism
pba00541
Biosynthesis of various nucleotide sugars
pba01100
Metabolic pathways
pba01250
Biosynthesis of nucleotide sugars
Module
pba_M01018
GDP-D-Rha biosynthesis, GDP-Man => GDP-D-Rha
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
PSEBR_a5629
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PSEBR_a5629
Enzymes [BR:
pba01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.47 GDP-mannose 4,6-dehydratase
PSEBR_a5629
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
adh_short
NmrA
KR
Motif
Other DBs
NCBI-ProteinID:
AEA72168
LinkDB
All DBs
Position
6799083..6800051
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AA seq
322 aa
AA seq
DB search
MKSALITGITGQDGAYLAKLLLDKGYKVHGLVARRSSDSRWRLREMGIEQDIVYLDGDMA
DACSVQRAVIKSAPDEVYNLAAQSFVAASWDQPVTTGIVDGLGVTHLLEAIRQFSVHTHF
YQASTSEMFGLIQAEQQDEHTPFYPRSPYGVAKLYGHWITVNYRESFGLHASSGILFNHE
SPLRGIEFVTRKVTDAAARIKQGKQQELRLGNIDAKRDWGFAGDYVEAMWLMLQQDTPDD
YVVATGVTTTVREMCRIAFEHVGLDYRDFIKIDPAFFRPAEVEVLLGNPAKAQRVLGWKP
RTDLDTLIRMMMDADMKRVAKE
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtgcattgatcacagggatcaccggtcaagacggcgcgtatctggccaagttg
ctgctcgacaagggttataaggtccacggcctggtggcacgacgaagcagcgactcgcgc
tggcggctgcgagagatgggcatcgaacaggacatcgtttacctggacggtgacatggcc
gatgcctgctcggtgcaacgggccgtgatcaagtcggcaccggacgaggtgtacaacctg
gcggcgcaaagtttcgtcgcggcctcctgggaccaacccgtgaccaccggcattgtcgat
ggactgggggtcacccacctgctcgaagccattcgccagttcagcgtgcatacgcacttc
taccaggcgtccaccagcgaaatgttcggcctgatccaggccgaacagcaggacgagcac
accccgttttacccacgcagcccctatggcgtggcgaaactgtacggtcactggatcacc
gtcaactaccgggaaagcttcggcctgcatgccagcagcggcatcctgttcaaccacgag
tcaccgctgcgtggcatcgagttcgtcacccgcaaggtcaccgacgctgcagcacgcatc
aagcagggcaagcagcaggagttgcgcctgggcaatatcgacgccaagcgcgactggggc
tttgctggcgattacgtcgaggccatgtggctgatgttgcaacaggacactcccgacgat
tacgtagtggccacgggcgtcaccaccactgtgcgcgagatgtgcaggattgccttcgaa
cacgtgggcctggactaccgtgacttcatcaagatcgacccggcgtttttccgcccggcc
gaagtcgaagtgctactcggcaacccggccaaggcacaacgcgtcctgggctggaagccc
aggaccgacctcgacaccctgatccgcatgatgatggatgcggacatgaaacgcgtcgcc
aaggagtag
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