Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a684
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Entry
PSEBR_a684 CDS
T01472
Name
(GenBank) Exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Pathway
pba03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PSEBR_a684
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pba03400
]
PSEBR_a684
Enzymes [BR:
pba01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PSEBR_a684
DNA repair and recombination proteins [BR:
pba03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSEBR_a684
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
AAA_11
UvrD_C_2
NAT10_TcmA_helicase
SH3_13
Viral_helicase1
AAA_22
UvrD-helicase
AAA_17
AAA_16
SLFN-g3_helicase
AAA_25
AAA_28
T2SSE
PhoH
TraI_hel_assoc_N
NTPase_1
AAA_5
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AEA66832
UniProt:
F2KBQ0
LinkDB
All DBs
Position
857164..859260
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AA seq
698 aa
AA seq
DB search
MSRSFADLLPKSSDDESLVELAPLSRAQDLLLLLTRWVERGWLRALDKAFVAFLHELAPD
DDPLVLLAAALTSHQLGHGHVCLDVFETLKEPDFALSLPPEGDLQTGVMLLPSQILATLD
GVHWCKVLASSRLVALAVDGSEEAQQRPLVLSGKRLYLRRYWGYERRIDEALRQRLIEHE
AAPGDLRERLDGLFGPANASGPIDWQKLACALATRGSFSIVTGGPGTGKTTTVVRLLALL
QAPAVEAGKPLRIRLAAPTGKAAARLTESISQQVRTLDVDDAVRERIPCDVTTVHRLLGS
RPGTRHFRHHAGNRLPLDVLVVDEASMIDLEMMANLLDALPAHARLVLLGDKDQLASVEA
GAVLGDLCRDAEEGWYSPRTRAWLESVSGENLAAGDLQQDLDGTHPLAQQVVMLRHSRRF
GEGSGIGQLARWVNQQQPEKARQLLEQGQHADLSSLKLANEHDTKLEKLLLDGKPDGSQG
YRHYLNLLRQRRPAISRSLEDRCWTDWAREVLAAFDEFQLLCAVRKGPWGVEGLNLRITA
ALLKARLIDSDHQWYEGRPVLMTRNDYGLGLMNGDIGIALKLPERDGPDAGKQVLRVAFP
RNDGQGGVRFVLPSRLNDVETVYAMTVHKSQGSEFTHTALILPDALNPVLTKELVYTAIT
RGKQWFSLIEPRAGVFEEAVRRKVKRLSGLMLELEGDD
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgttcttttgccgacctgctgcccaagtcgtccgacgacgaaagcctggtggag
ttggcgcccttgagccgtgcgcaggacctgctgttgttactgacgcgctgggtcgagcgc
ggctggttgcgcgccctggacaaggccttcgtggcgttcctccatgaactggcacccgac
gatgatccattggtcctgctcgccgctgcgttgaccagtcatcaactgggtcacgggcat
gtttgcctggatgtgttcgagaccctcaaggaaccggattttgctctgtccctgcctccc
gagggtgacctgcagacgggtgtgatgctgctgccatcgcaaatattggcgacactggac
ggcgtccattggtgcaaggtcctggcgtccagtcgtctggtggccctggccgtggatggg
agcgaagaggcgcagcaacgtccgttggtgctgtctggcaaacgtctttatctgcgccgc
tactggggttatgaacggcggatcgatgaagcgttgcgtcaacggcttatcgagcatgaa
gcggcgcccggcgacctgcgcgagcgtttggacgggttgttcgggccggccaatgccagc
ggcccgatcgattggcagaaactggcctgcgcgctggcaacccgcgggtccttcagcatc
gtgaccggcggcccgggcaccggcaagaccacgaccgttgtgcgcctgctggccctgctc
caggcaccggccgtcgaggccgggaagccgctgcggattcgcctggccgcgcccactggc
aaggcggcggcgcgcctgaccgagtccatcagccagcaggtccggaccctggatgtggac
gacgcggtgcgcgaacggattccctgcgacgtcacgacagtccatcgtttgctgggcagc
cgccctggcacccggcattttcgccaccatgcaggcaatcgcttgccactggatgtgttg
gtggtcgatgaagcgtcgatgatcgacctggagatgatggccaatctgctggatgctctg
ccggcccatgcacggttggtattgctgggggacaaggaccagttggcctctgtagaagcc
ggtgcggtgctcggggatttgtgtcgagacgccgaggagggctggtacagcccccggacc
cgagcctggcttgagtcggtcagcggtgaaaacctggcggccggtgacctgcaacaggac
ctcgacggcactcatcccctggcacagcaagtggtcatgctcaggcattcccggcgcttc
ggcgaaggcagcgggatcggtcagctggctcgctgggtcaaccagcagcagcctgaaaaa
gcccgtcagttgctggagcaagggcagcatgccgatctgtcttccctgaagttggcgaat
gaacacgacacgaaactggagaagctgttactcgacggcaagccagatgggtcccagggg
tatcggcattacctgaacctgctacggcagcgacgcccggccatttctcgctcgctggaa
gaccgttgctggaccgattgggcccgggaagtcctggcggccttcgacgaattccaattg
ctttgcgcggtgcgcaaaggtccgtggggcgtcgaaggactgaacctgcgaatcaccgcc
gccttgctcaaggcacgccttatcgatagcgatcatcagtggtacgaaggacgcccggtg
ctgatgacccgcaacgactatgggctggggctgatgaacggcgatatcggtatcgccctc
aagttgcccgagcgtgacgggcctgatgctggaaaacaggttctgcgggtcgctttcccg
cgcaacgacggtcagggcggtgtgcgtttcgtcctgcccagccgcctgaatgatgtggaa
accgtgtatgccatgacggtgcacaaatcccagggctcggaattcacccataccgcgttg
attctcccggatgcgctgaacccggtattgaccaaggagttggtgtacaccgccattact
cggggcaagcaatggttcagcctgatagagccgcgagcgggggtgtttgaggaggcggtg
cggcgcaaggtcaagcgcttgagcgggctgatgttggaactggagggtgatgactga
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