Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a686
Help
Entry
PSEBR_a686 CDS
T01472
Name
(GenBank) Putative diguanylate cyclase
KO
K21021
diguanylate cyclase [EC:
2.7.7.65
]
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Pathway
pba02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PSEBR_a686
Enzymes [BR:
pba01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
PSEBR_a686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
CHASE8
HAMP
DUF7801
Rootletin
SMP_2
Motif
Other DBs
NCBI-ProteinID:
AEA66834
UniProt:
F2KBQ2
LinkDB
All DBs
Position
859972..861240
Genome browser
AA seq
422 aa
AA seq
DB search
MSLSKSRVRPTLGSVIGRGHLIVALVAITMASVSLTLLGVLALRVYADHNLHLIARSINY
TVEAAVVFDDAAAATEALALIASTEEVADAQVFNEHGRLLARWKRPDTGLLSELEMHIAK
AFLEKPISLPIVHQGRNIGSILLAGHGGSLLRFLLSGLAGIILCTAVSAWVALYLARRQL
RAITGPLRSLAEVAHAARSERALDRRVPPAAIAELDNLANDFNALLDELESWQTHLQSEN
ETLAHQASHDSLTGLPNRAFFEGRLIRALRNASKLNEQVAVLYLDSDRFKGINDNFGHAA
GDAVLTAVATRVRAQLREDDLVARLGGDEFAVLLAPLHKAEDAERIAEKIIASMEMPIQL
PGNASVLTSLSIGIAVYPDDGATPGTLLHAADAAMYQAKRLARGGQHTAESDHSVADLQT
RS
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgtccaaatcgcgggtccgtcccaccctgggctcggtcatcgggcgcggccac
ctgattgtcgcgttggtggcgatcaccatggccagtgtttccctgacgttgctgggtgtg
cttgcgttgcgggtctacgccgatcacaacctgcacctgatcgcccgctcgatcaactac
accgtggaagcggccgtggtattcgatgacgcggcggcggccaccgaggcgctggcgttg
attgcctccaccgaggaggtcgccgatgcccaagtgttcaatgagcacggccgcctgttg
gcgcgctggaaacgtccggataccggtttattgtcggaactggaaatgcacattgccaag
gcgtttttggaaaagcccatcagtctgccgatcgttcatcaagggcggaacatcggcagc
attctattggcagggcatggcggcagcctgttgcgctttttgctcagcggtctggcgggg
atcattttgtgcacggcggtgagtgcctgggtagcgttgtacctggcgcgacgtcagctg
cgggcgatcaccggaccattgcgcagcctggccgaagtggcccacgcggcacgcagcgag
cgggccctggatcggcgcgtgccgccggccgccatcgccgaactggataacctggccaat
gacttcaatgcactgctcgacgaactggagtcctggcagactcacctgcaaagcgaaaac
gaaaccctggcacaccaggccagtcacgacagcttgaccggtttgccgaaccgggcgttt
ttcgagggccggctgatccgcgccttgcgcaacgccagcaagctcaacgagcaagtggcc
gtgttgtacctcgacagcgaccggttcaagggcatcaacgacaatttcggtcatgctgcc
ggtgacgcggtgctgacggccgtggcaacccgggtccgggcacagttgcgtgaagacgac
ttggtcgcacgcctgggaggcgatgaattcgccgtgctgctggcacctctgcacaaggcc
gaggacgccgagcggatcgctgaaaaaattatcgccagcatggaaatgccgattcaactg
cctggcaatgcttcagtgctgacgtccctcagtatcggcattgccgtttaccccgatgat
ggtgcgacaccgggcacccttctccatgccgccgatgcggcgatgtaccaagccaaacgc
ctcgcccgaggcggtcaacatacggcggagtcggatcactccgtcgctgatcttcaaacc
aggagctga
DBGET
integrated database retrieval system
