Pseudomonas brassicacearum subsp. brassicacearum NFM421: PSEBR_a747
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Entry
PSEBR_a747 CDS
T01472
Name
(GenBank) Hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pba
Pseudomonas brassicacearum subsp. brassicacearum NFM421
Pathway
pba03420
Nucleotide excision repair
pba03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PSEBR_a747
03430 Mismatch repair
PSEBR_a747
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pba03400
]
PSEBR_a747
Enzymes [BR:
pba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PSEBR_a747
DNA repair and recombination proteins [BR:
pba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PSEBR_a747
MMR (mismatch excision repair)
Other MMR factors
PSEBR_a747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AEA66909
UniProt:
F2K833
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All DBs
Position
966927..968801
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AA seq
624 aa
AA seq
DB search
MISLDAVVSNDDVDDAVDVEISRCLNLDDPQSFFLFAGAGSGKTRSLVTALKKVQIDFGS
RLRFKGQRVGVITYTNAASEEIERRLAFDPTIEVSTIHSFAWSLIEGLNRDIREWLRLDL
AADIEKLNKDEAKGRAGTKASATRLSKIASKTKRLANLDSVKRFVYSPTGENRGRDSLNH
SEVIQLTSHFLSSKPAMQSILVGRFPLLLIDESQDTNKNLIDALFAVQSTHKARFALGLL
GDMMQRIYSDGKEGLGQNLPGDWATPTKQMNHRCPRRVVSLINKVREATDKQQQKWRSDS
AEGCIRLYILPSETSDKQAAEKAIGEHMAKVSADDNWNDLKTCKTLTLEHRMAARRMGFL
EMFVPLYEVESWRPNFLDGSLPIVRFFSEEVLPLIQAKKREDRFGIARIAREHSPLLSVD
ALRAGDNSQSQLQLVASSIDQLMSLWVDGADPSLAEVLRNVAATKLFPIPELLQPNAYRD
KALDAVEPAVDGVDADRQSERAAAIDAFLEAPFSQIEPFANYVSGKAHFDTHQGVKGLQF
DRVMVIMDDEEARGFMFKYENLFGGKGVGDPSVESTRRLFYVTCSRAMQSLALVAYTSSP
GRVSKFAINEGWFSADEIVTDIGL
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgatatccctcgatgcggtggtgtctaacgacgacgttgatgatgccgtcgatgttgag
atatctaggtgcctcaacctcgatgacccacagagtttttttctgtttgcaggtgctgga
tctgggaagactcggtcactcgttaccgcccttaagaaggtgcagattgacttcggctcg
cggctgagattcaaagggcagcgagtgggcgttatcacgtatacgaatgcagccagtgaa
gaaattgaaagacgcctggcattcgatccgacgatagaagtgtcgactatccatagtttc
gcctggtcactgatcgaggggttgaaccgagatattcgcgaatggctccgtttggatctt
gcagccgacatagagaaactcaataaggatgaagcaaaaggtcgtgccggtactaaggca
tcggcgacacgccttagcaaaatcgcctcaaaaaccaagcgtcttgcaaacctcgattcg
gtaaagcgattcgtatatagcccaaccggagaaaaccgaggcagagattcgcttaatcac
tcagaggtgattcaacttacatcgcatttcctgtcgagcaaacctgctatgcagagcatt
ctggttggccgcttcccgctcctcttgatcgacgaaagccaggacacgaacaagaatttg
atcgatgcgctattcgcggtgcagtccacgcacaaggcgcgctttgctcttggtctgctc
ggcgacatgatgcagcgtatctacagcgacggtaaggagggccttggtcagaacttgccg
ggcgactgggcgacgccgaccaaacagatgaaccatcgctgtccgaggcgggttgtcagt
ttgatcaacaaggtgcgcgaggcgaccgataagcagcagcagaaatggcgatccgatagc
gctgagggctgcatccggctctatattctccccagcgagacatctgataaacaggccgcc
gagaaggcaatcggtgagcatatggccaaggtatcggcagatgacaattggaatgatctg
aagacatgtaaaaccctcacgcttgaacatcgtatggctgcgagacgcatgggtttcctt
gagatgttcgtaccgctttacgaggttgagagctggcgcccgaattttcttgatggctcg
cttccgattgttcgttttttctctgaagaggtcttgccgcttatccaagctaagaaacgc
gaggatcgttttggcatagcgcgtattgcacgcgagcattcaccgctgctgtcggttgat
gcgttgcgcgccggggacaatagtcagtcacagcttcagctcgttgcatcatcaatcgat
cagcttatgtcgctgtgggtagacggggcggacccatcgctcgccgaagtcctccgcaac
gtagcagcgacaaaactctttccgattcccgagttgctacagccaaacgcttatcgcgac
aaggctctcgatgcggttgagccggccgttgatggggtggatgccgaccgacagagcgaa
cgtgcggcagctattgatgcgttcctagaggccccattctcccagattgagccgttcgcc
aactatgtttctgggaaggctcacttcgatacgcatcagggagtgaaggggctgcagttc
gatcgcgtgatggtcatcatggatgacgaagaagcccgaggcttcatgtttaagtacgag
aatctcttcgggggaaaaggtgttggtgatccttcggtagaaagcactcggcggctgttt
tacgtcacttgcagtcgcgccatgcagagcctagcccttgtggcttatacctcctcgccc
gggcgcgtgagtaagtttgcgatcaatgaaggctggttctccgctgacgaaattgtgacg
gacatagggttgtaa
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