Pseudomonas bambusae: AAEO81_01600
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Entry
AAEO81_01600 CDS
T11347
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
pbab Pseudomonas bambusae
Pathway
pbab02025
Biofilm formation - Pseudomonas aeruginosa
pbab03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pbab00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
AAEO81_01600 (tssH)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
AAEO81_01600 (tssH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pbab02044
]
AAEO81_01600 (tssH)
Secretion system [BR:
pbab02044
]
Type VI secretion system
Imp/Vas secretion system core components
AAEO81_01600 (tssH)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
AAA_16
AAA_22
Clp_N
NBD_SMAX1
Sigma54_activat
Zeta_toxin
AAA_25
nSTAND3
TniB
AAA_7
ATPase_2
NACHT
AAA_14
AAA_18
Torsin
CbiA
Hpr_kinase_C
SRP54
Motif
Other DBs
NCBI-ProteinID:
WZO61989
LinkDB
All DBs
Position
complement(353489..356167)
Genome browser
AA seq
892 aa
AA seq
DB search
MGEISRAALFGKLNSVGYKAIEAATVFCKLRGNPYVELAHWFHQLLQLQDSDLHRIIRQF
NVEPARLARDLTEALDRLPRGSTSITDLSSHVEEAVERGWVYGSLMFGESQVRTGYLLIG
ILKTPSLRHALLGLSGEFDKIKTEALSERFDEYVGDSPENALSANDGFNAASTPGEASGA
IAPSAMGKQEALKRFTVDMTEQARSGKLDPIVGRDEEIRQMVDILMRRRQNNPILTGEAG
VGKTAVVEGFALRIVAGDVPPALKDVELRSLDVGLLQAGASMKGEFEQRLRQVIEDVQAS
PKPIILFIDEAHTLVGAGGAAGTGDAANLLKPALARGTLRTVAATTWAEYKKHIEKDPAL
TRRFQVVQVGEPSEDKALLMMRGVASTMEKHHQVQILDEALEASVKLSHRYIPARQLPDK
SVSLLDTACARVAMSLHAVPAEVDDSRRRIEALETELQIIAREHAIGIDTGARRTNSENL
LSSERARLTELESRWSEEKSLVDELLATRAELREIAGVVDQDVGAGQSHALREKLVDLQS
RLSALQGESPLILPTVDYQAVASVVADWTGIPVGRMARNELETVLNLDQHLKKRIIGQDH
ALQMIAKRIQTSRAGLDNPSKPIGVFMLAGTSGVGKTETALALAEAMYGGEQNVITINMS
EFQEAHTVSTLKGAPPGYVGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVHEIFFQVFD
KGVMEDGEGRVIDFKNTLILLTTNAGTELISHLCKDAQNVPDPEEIAKALRQPLLEIFPP
ALLGRLVTIPYYPLSDTMLKAITRLQLNRIKKRVENTHKVAFDYDDAVVDLIVSRCTETE
SGGRMIDTILTNTLLPDMSREFLTRMLDGKPMAGVRISERDNQLDYQFSDRG
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaatcagtcgcgcggcgctgttcggcaaactcaacagtgttggttacaaggct
atcgaagccgccacggtcttttgcaagctgcggggcaacccgtacgtggaactggcgcac
tggtttcatcagttactgcaactgcaagattccgacctgcaccgcatcattcgccaattc
aacgtcgaaccggcgcgcctcgcccgcgacttgaccgaagcgctggatcgcctgccacgc
gggtcgacgtcgatcaccgatctgtcgtcccatgtcgaagaagccgtcgagcgcggctgg
gtttacggcagcctgatgtttggtgaaagccaggtgcgcacgggctatctgctgatcggc
atcctcaagacgccaagcctgcgtcacgcgttgctgggcctgtcaggcgagttcgacaag
atcaaaaccgaagccctgagtgagcgctttgacgagtacgttggcgattccccggaaaac
gccctcagcgccaacgacggcttcaacgccgcctcgacacccggcgaggccagcggcgca
atcgcgccgagtgcgatgggcaaacaggaagccctcaaacgtttcaccgtggacatgacc
gaacaggcccgtagcggcaagctcgaccctatcgtcgggcgcgacgaagagattcggcaa
atggtcgacatcctcatgcgccgtcggcagaacaacccgatcctcacgggtgaagcgggc
gtcggcaaaaccgccgtggtcgaaggctttgcgctgcgtattgtggccggtgacgtgcca
cctgcactcaaggacgtcgaactgcgcagcctcgacgtcggcctgttgcaagccggggcg
agcatgaaaggcgagttcgaacagcgtctgcgtcaggttatcgaagacgttcaggcctcg
ccgaagccgatcatcctgttcattgacgaagcccatacgctggtgggcgcgggcggtgcg
gcggggacgggcgatgccgccaacctgctgaagcccgctctggcgcggggcaccttgcgc
acggtcgcggcgacgacgtgggccgagtacaaaaaacacattgagaaagaccccgccctc
acccgacgtttccaggtggtgcaggtcggcgagccgtcggaggacaaggccctgctgatg
atgcgcggcgtcgcctcgacgatggaaaaacaccatcaggtgcagattctggacgaagcg
ctggaggcctcggtcaagctgtcccatcgctacattccagcgcgtcagttgccggataaa
tccgtcagcctgctggacaccgcctgcgcccgcgttgccatgagcttgcacgcggtgcct
gcggaggtcgacgacagccgtcgccggatcgaagcgctggaaaccgagttgcagatcatt
gcgcgggagcatgcgattggtatcgacacgggcgcacgccgcaccaacagcgagaatctg
ctgagcagcgagcgcgcacgactgacagaactggaaagccgctggagcgaagagaagtcg
ctggtggacgagctgctcgccacacgcgccgagttgcgcgaaatcgcgggcgtcgtcgat
caggacgttggggccgggcaaagccacgcgctgcgggaaaagctggttgacctgcaatca
cgcctcagcgccctgcaaggcgaaagcccgttgattctccccaccgtcgattatcaggcc
gtcgcctcggtggtcgccgactggaccggcatccccgtcggccgcatggcgcgcaacgag
ctggaaaccgtgctcaacctcgaccagcacttgaaaaagcgcatcatcggccaggaccac
gcgctgcagatgatcgccaagcgcatccagacgtctcgcgcgggcctcgacaacccgagc
aaacccatcggcgtgttcatgctcgcgggcacctcgggggtgggcaagaccgaaaccgcc
ctcgccctggccgaagccatgtacggcggcgagcagaacgttatcaccatcaacatgagc
gagttccaggaagctcacacggtctcgacgctcaagggcgccccgcccggttacgtcggc
tacggcgaaggcggcgtgctgaccgaggcggtgcgtcgcaaaccgtacagcgtcgtgctg
ctggacgaggtggaaaaagctcacccggatgtgcacgaaatcttctttcaagtgttcgac
aagggcgtgatggaagatggcgaaggccgggtgatcgacttcaagaacaccctgatcctg
ctcaccaccaacgccggtaccgagctgatttcacacctgtgcaaagacgcgcaaaacgtg
cccgatccggaagagatcgccaaagccctacgtcagccgttgctggaaatcttcccgccc
gcgctgctcgggcggctggtgaccatcccgtattacccgctgagcgacaccatgctcaag
gcgatcacgcgtctgcaactgaaccgcatcaagaaacgcgtggaaaacacgcacaaggtc
gcattcgactacgacgacgcggtggtcgatttgatcgtctcgcgctgcaccgaaaccgaa
agcggcggccgaatgatcgacaccattctgaccaacaccctgctgccggacatgagccgc
gagttcctgacgcgcatgctcgacggcaagccgatggcgggggtcaggatcagcgagcgg
gataaccagttggattatcaatttagcgatcgaggttaa
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